RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ZNF619Q8N2I2 560 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF614Q8N883 585 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 OR2M7Q8NG81 312 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF597Q96LX8 424 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 JSRP1Q96MG2 331 aaPredicted RBP9.64□□□□□ -0.87
RPAIN-204ENST00000405578 SLC39A3Q9BRY0 314 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 SPATA5L1Q9BVQ7 753 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 HES7Q9BYE0 225 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF350Q9GZX5 532 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 TMEM38AQ9H6F2 299 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 ARMC7Q9H6L4 198 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 KAT8Q9H7Z6 458 aaKnown RBP9.64□□□□□ -0.87
RPAIN-204ENST00000405578 SPAG4Q9NPE6 437 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 OLAHQ9NV23 265 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 ARL8BQ9NVJ2 186 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 CNOT11Q9UKZ1 510 aaKnown RBP9.64□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF232Q9UNY5 417 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 ANGPT4Q9Y264 503 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 KCNE3Q9Y6H6 103 aa9.64□□□□□ -0.87
RPAIN-204ENST00000405578 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.64□□□□□ -0.87
RPAIN-204ENST00000405578 ACANP16112 2415 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 TRGV8A0A0C4DH27 118 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 A0A0G2JPF8 293 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 CCT8L1PA6NM43 557 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 HNRNPCL2B2RXH8 293 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 HNRNPCL3B7ZW38 293 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 ALG1L2C9J202 215 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 G3V3Y1 287 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 FXYD1O00168 92 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 GTPBP1O00178 669 aaKnown RBP9.63□□□□□ -0.87
RPAIN-204ENST00000405578 NDUFB5O43674 189 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 KIAA0513O60268 411 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 HNRNPCL1O60812 293 aaKnown RBP9.63□□□□□ -0.87
RPAIN-204ENST00000405578 DNAJA2O60884 412 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 TNFRSF21O75509 655 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 OXSR1O95747 527 aaPredicted RBP9.63□□□□□ -0.87
RPAIN-204ENST00000405578 IGKV1D-16P01601 117 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 BCHEP06276 602 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 TFPTP0C1Z6 253 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 HNRNPCL4P0DMR1 293 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF24P17028 368 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 CPA2P48052 419 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 DNASE1L1P49184 302 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 PSME3P61289 254 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 CDK6Q00534 326 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 C17orf67Q0P5P2 114 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 SCARB2Q14108 478 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 SYPL1Q16563 259 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 ZSWIM7Q19AV6 140 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 GRAMD1BQ3KR37 738 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 RABL3Q5HYI8 236 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 REEP3Q6NUK4 255 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 ERICH5Q6P6B1 374 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 PEX5LQ8IYB4 626 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 ANKFN1Q8N957 763 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 HIPK4Q8NE63 616 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 TNIP2Q8NFZ5 429 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 OR1J4Q8NGS1 313 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 OR4C3Q8NH37 302 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 OR10A6Q8NH74 314 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 BBS10Q8TAM1 723 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 SLC38A5Q8WUX1 472 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 TMEM19Q96HH6 336 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 TMEM41AQ96HV5 264 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 REXO5Q96IC2 774 aaKnown RBP9.63□□□□□ -0.87
RPAIN-204ENST00000405578 NODALQ96S42 347 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF607Q96SK3 696 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 PTGES2Q9H7Z7 377 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 ZFP64Q9NPA5 681 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 PPP4R1LQ9P1A2 415 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 MKLN1Q9UL63 735 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 WIF1Q9Y5W5 379 aa9.63□□□□□ -0.87
RPAIN-204ENST00000405578 SCN2AQ99250 2005 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 A0A1W2PQD3 144 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 B2RBV5 119 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 FAM47E-STBD1D6RA91 191 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 C19orf84I3L1E1 186 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 CCL21O00585 134 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 TFECO14948 347 aaPredicted RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 SCO2O43819 266 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 FADS1O60427 444 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 FCMRO60667 390 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 GMNNO75496 209 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 SERPINB7O75635 380 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 CBR3O75828 277 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 PDE9AO76083 593 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 ANGPTL1O95841 491 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 C1QCP02747 245 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 DBIP07108 87 aaKnown RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 ARAFP10398 606 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 IL7RP16871 459 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 MSX1P28360 303 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 GCKP35557 465 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 RASSF2P50749 326 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 SLC7A2P52569 658 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 ALDH6A1Q02252 535 aaKnown RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 CHRNEQ04844 493 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 LARS2Q15031 903 aaKnown RBP9.62□□□□□ -0.87
RPAIN-204ENST00000405578 ZNF141Q15928 474 aa9.62□□□□□ -0.87
RPAIN-204ENST00000405578 TIGD3Q6B0B8 471 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms