RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SSPNQ14714 243 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ENTPD8Q5MY95 495 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 DCST1Q5T197 706 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NDUFAF7Q7L592 441 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 MARCH3Q86UD3 253 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 RANBP3LQ86VV4 465 aaPredicted RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 OFCC1Q8IZS5 231 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SLC34A3Q8N130 599 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 CADM2Q8N3J6 435 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 GALNT15Q8N3T1 639 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SLC5A8Q8N695 610 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PACRGLQ8N7B6 248 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SLC7A13Q8TCU3 470 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 GRHL3Q8TE85 626 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 GTPBP3Q969Y2 492 aaKnown RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 HSPBAP1Q96EW2 488 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ZNF597Q96LX8 424 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ZNF570Q96NI8 536 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 FEVQ99581 238 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 EPYCQ99645 322 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ARHGDIGQ99819 225 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ADI1Q9BV57 179 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 OSBPL10Q9BXB5 764 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 TBL1XR1Q9BZK7 514 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 Q9H521 79 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 MYOTQ9UBF9 498 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 IL17BQ9UHF5 180 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 FBXL4Q9UKA2 621 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NPFFR2Q9Y5X5 522 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NUP210LQ5VU65 1888 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NCOR2Q9Y618 2525 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 LOC102723996A0A087X1L8 192 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 C2orf72A6NCS6 295 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 TMEM200CA6NKL6 621 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 H3BNH8 94 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SOCS6O14544 535 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 HCRTR2O43614 444 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 CCNB2O95067 398 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NUDT14O95848 222 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 GNAO1P09471 354 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 THRBP10828 461 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ACADSP16219 412 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 POLR2IP36954 125 aaKnown RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 HSPA13P48723 471 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 DAPP51397 102 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PPP2R2BQ00005 443 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 MERTKQ12866 999 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 IL10RAQ13651 578 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 GK3PQ14409 553 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SEC23BQ15437 767 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 CD226Q15762 336 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ZNF141Q15928 474 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 EXT1Q16394 746 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 MICAQ29983 383 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 RNF220Q5VTB9 566 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 OR5M10Q6IEU7 315 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 APOOLQ6UXV4 268 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 RRM2BQ7LG56 351 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PPP1R32Q7Z5V6 425 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ZNF605Q86T29 641 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 MEX3DQ86XN8 651 aaKnown RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 ZNF441Q8N8Z8 693 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NUBPLQ8TB37 319 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PMM1Q92871 262 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SLC41A3Q96GZ6 507 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PRRC1Q96M27 445 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 OSBPL11Q9BXB4 747 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 HOXD1Q9GZZ0 328 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ZNF700Q9H0M5 742 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 TOR3AQ9H497 397 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 RIBC2Q9H4K1 309 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 GPN2Q9H9Y4 310 aaPredicted RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 ZNF556Q9HAH1 456 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 KRT84Q9NSB2 600 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 P4HTMQ9NXG6 502 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 DNAJB12Q9NXW2 375 aaKnown RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 DLL3Q9NYJ7 618 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SLC7A7Q9UM01 511 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 CARD8Q9Y2G2 431 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 LRCH1Q9Y2L9 728 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PCDHGA6Q9Y5G7 932 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 PCDHGA10Q9Y5H3 936 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 DMXL2Q8TDJ6 3036 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 IGF2RP11717 2491 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 C21orf140B9A014 251 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NPIPB9F8W1W9 429 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 KPNA4O00629 521 aaPredicted RBP3.41□□□□□ -1.86
RTN4-208ENST00000404909 DLGAP1O14490 977 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 GNB5O14775 395 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 SLC30A4O14863 429 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 TO15178 435 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 NDUFB5O43674 189 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ADAM11O75078 769 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ITGA10O75578 1167 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 IGHEP01854 428 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 CYC1P08574 325 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 RAB40ALP0C0E4 278 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 LINGO3P0C6S8 592 aa3.41□□□□□ -1.86
RTN4-208ENST00000404909 ELAVL4P26378 380 aaKnown RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms