RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 CNTN4Q8IWV2 1026 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 NRMQ8IXM6 262 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 HORMAD2Q8N7B1 307 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 TMEM185AQ8NFB2 350 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 OR5M3Q8NGP4 307 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 OR4K13Q8NH42 304 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 OR2M4Q96R27 311 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 CNN2Q99439 309 aaKnown RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 CENPOQ9BU64 300 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 TREX1Q9NSU2 369 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 CNIH4Q9P003 139 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 KLHL9Q9P2J3 617 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 AK6Q9Y3D8 172 aaKnown RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 USP3Q9Y6I4 520 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 ZNF705FA8MVS1 300 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 GOSR2O14653 212 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 ARPC1BO15143 372 aaKnown RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 PRAF2O60831 178 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 SC5DO75845 299 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 ALPLP05186 524 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 ZNF705DP0CH99 300 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 ZNF705BP0CI00 300 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 ACPPP15309 386 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 GNB3P16520 340 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 CRYZQ08257 329 aaKnown RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 APOFQ13790 326 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 GBX1Q14549 363 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 SF3A2Q15428 464 aaKnown RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 RTL6Q6ICC9 239 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 TMEM107Q6UX40 140 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 CELF2-AS1Q8N7Q2 184 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 OR13F1Q8NGS4 319 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 GPR150Q8NGU9 434 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 MFFQ9GZY8 342 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 SMG9Q9H0W8 520 aaKnown RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 TSPAN10Q9H1Z9 355 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 THSD1Q9NS62 852 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 SPO11Q9Y5K1 396 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 WNT6Q9Y6F9 365 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 CSNK1G3Q9Y6M4 447 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 SHOXO15266 292 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 GPR137BO60478 399 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 HPGDSO60760 199 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 NUDT7P0C024 238 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 HLA-EP13747 358 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 MAOAP21397 527 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 GABRA3P34903 492 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 VSX2P58304 361 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 RPS15P62841 145 aaKnown RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 PLGLAQ15195 96 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 NDUFAF5Q5TEU4 345 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 IL22RA1Q8N6P7 574 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 FAM83FQ8NEG4 500 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 SLC7A13Q8TCU3 470 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 SORCS1Q8WY21 1168 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 KHSRPQ92945 711 aaKnown RBP eCLIP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 MMABQ96EY8 250 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 PRMT8Q9NR22 394 aaPredicted RBP8.38□□□□□ -1.07
PTPRM-202ENST00000400053 HRASLS2Q9NWW9 162 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 CACNG2Q9Y698 323 aa8.38□□□□□ -1.07
PTPRM-202ENST00000400053 CHRNB1P11230 501 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 GIFP27352 417 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 TAS2R30P59541 319 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 SLAMF1Q13291 335 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 SELPLGQ14242 412 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 AGAP7PQ5VUJ5 663 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 ZNF691Q5VV52 312 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 C17orf99Q6UX52 265 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 OR7G1Q8NGA0 311 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 OR52E2Q8NGJ4 325 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 RSC1A1Q92681 617 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 NT5C3BQ969T7 300 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 UPRTQ96BW1 309 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 EGLN2Q96KS0 407 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 OR1F2PQ96R84 312 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 LMF1Q96S06 567 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 KCNJ16Q9NPI9 418 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 HEBP1Q9NRV9 189 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 C2orf42Q9NWW7 574 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 HAO2Q9NYQ3 351 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 REV1Q9UBZ9 1251 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 PGAP2Q9UHJ9 254 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 ATG4BQ9Y4P1 393 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 SLX4Q8IY92 1834 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 C20orf202A1L168 122 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 ANKRD34BA5PLL1 514 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 C2orf78A6NCI8 922 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 DUX1O43812 170 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 TGM6O95932 706 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 SERPINE2P07093 398 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 LRIT3Q3SXY7 679 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 COMMD6Q7Z4G1 85 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 SKA3Q8IX90 412 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 ECHDC3Q96DC8 303 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 CASD1Q96PB1 797 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 PITX2Q99697 317 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 ZNF559Q9BR84 538 aa8.37□□□□□ -1.07
PTPRM-202ENST00000400053 PAPOLGQ9BWT3 736 aaKnown RBP8.37□□□□□ -1.07
PTPRM-202ENST00000400053 ACTL7AQ9Y615 435 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms