RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 COL28A1Q2UY09 1125 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 LIN52Q52LA3 116 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF551Q7Z340 670 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PLXDC1Q8IUK5 500 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 MBD3L2Q8NHZ7 208 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 WIPF2Q8TF74 440 aaPredicted RBP5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 TMEM79Q9BSE2 394 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 ZNF385DQ9H6B1 395 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 PARVBQ9HBI1 364 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 KLHL1Q9NR64 748 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 CMTM6Q9NX76 183 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 A4GNTQ9UNA3 340 aa5.78□□□□□ -1.48
TRAPPC13-202ENST00000399438 TANC1Q9C0D5 1861 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 A0A087X1B8 175 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 MROH6A6NGR9 719 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 M0QYG6 137 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 TERTO14746 1132 aaKnown RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 NDUFA2O43678 99 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CLDN7O95471 211 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 FCER2P06734 321 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 ITGAMP11215 1152 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 B4GALT1P15291 398 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 IL7RP16871 459 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CD33P20138 364 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 HTR2AP28223 471 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CSKP41240 450 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CHN2P52757 468 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 STC1P52823 247 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 FOXL2P58012 376 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 RHOAP61586 193 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 SIM1P81133 766 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 ZNF33AQ06730 810 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 ACSM2AQ08AH3 577 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CDK5R2Q13319 367 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 NFYCQ13952 458 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 HLXQ14774 488 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 NDUFA5Q16718 116 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 ACSM2BQ68CK6 577 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 UGT2A3Q6UWM9 527 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 SLC35D2Q76EJ3 337 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 ZSWIM9Q86XI8 627 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 KLHDC8AQ8IYD2 350 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 SHISA5Q8N114 240 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 DNAAF1Q8NEP3 725 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 FCGR1BQ92637 280 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 KLHDC7BQ96G42 594 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 MARS2Q96GW9 593 aaKnown RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 HIST1H2AHQ96KK5 128 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CASD1Q96PB1 797 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 SERPINI1Q99574 410 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 HIST1H2AJQ99878 128 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CCDC28BQ9BUN5 200 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 MFSD1Q9H3U5 465 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 FAM124BQ9H5Z6 455 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 LYRM4Q9HD34 91 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 POLR3HQ9Y535 204 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 GREB1Q4ZG55 1949 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CNTRLQ7Z7A1 2325 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 JRKO75564 520 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 RSL1D1O76021 490 aaKnown RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 STC2O76061 302 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 NKX2-2O95096 273 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CRYGBP07316 175 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CHRM4P08173 479 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 OR2T7P0C7T2 308 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 SMIM18P0DKX4 95 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 IMPDH1P20839 514 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 PRPS1L1P21108 318 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 UQCRC2P22695 453 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 IL12AP29459 219 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 FEN1P39748 380 aaKnown RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 KIR2DL1P43626 348 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 HERVK_113P63132 956 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 MEF2AQ02078 507 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 PHKG1Q16816 387 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CYP51A1Q16850 503 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 CTSL3PQ5NE16 218 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 B3GLCTQ6Y288 498 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 GCNT2Q8N0V5 402 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 PELI3Q8N2H9 469 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 KRTCAP2Q8N6L1 136 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 BEND7Q8N7W2 519 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 FUBP1Q96AE4 644 aaKnown RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 ERVK-6Q9BXR3 956 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 SLC22A11Q9NSA0 550 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 FBLN5Q9UBX5 448 aa5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 TDRD15B5MCY1 1934 aaKnown RBP5.77□□□□□ -1.49
TRAPPC13-202ENST00000399438 ZNF840PA6NDX5 716 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 FBLL1A6NHQ2 334 aaKnown RBP5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 DLL1O00548 723 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 TOR1AO14656 332 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 ARHGEF15O94989 841 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 VAMP5O95183 116 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 RBP1P09455 135 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 FDXRP22570 491 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 CSRP3P50461 194 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 MRPL49Q13405 166 aaKnown RBP5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 SNTA1Q13424 505 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 CDH18Q13634 790 aa5.76□□□□□ -1.49
TRAPPC13-202ENST00000399438 CPSF6Q16630 551 aaKnown RBP eCLIP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms