RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PLEKHN1Q494U1 663 aaPredicted RBP13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 LRRN1Q6UXK5 716 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 GRAMD2AQ8IUY3 354 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 CHCHD4Q8N4Q1 142 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 OR5D16Q8NGK9 328 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 OR2T4Q8NH00 348 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 FESP07332 822 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 METTL2BQ6P1Q9 378 aaKnown RBP13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 PHC2Q8IXK0 858 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 NAGSQ8N159 534 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 OR51T1Q8NGJ9 327 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 CNIH4Q9P003 139 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 PCTPQ9UKL6 214 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 SHANK3Q9BYB0 1731 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 F5H0A9 414 aaPredicted RBP13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 F3P13726 295 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 PIGGQ5H8A4 983 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 BLOC1S3Q6QNY0 202 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 COMTD1Q86VU5 262 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 GPR26Q8NDV2 337 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 OR5AK2Q8NH90 309 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 SPTSSAQ969W0 71 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 ARMC1Q9NVT9 282 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 KLHL9Q9P2J3 617 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 DNAJC15Q9Y5T4 150 aa13.4□□□□□ -0.26
PCDHA11-201ENST00000398640 G3V3Y1 287 aa13.4□□□□□ -0.27
PCDHA11-201ENST00000398640 M0R233 179 aa13.4□□□□□ -0.27
PCDHA11-201ENST00000398640 WDPCPO95876 746 aa13.4□□□□□ -0.27
PCDHA11-201ENST00000398640 PRKXP51817 358 aa13.4□□□□□ -0.27
PCDHA11-201ENST00000398640 MRPL58Q14197 206 aaKnown RBP13.4□□□□□ -0.27
PCDHA11-201ENST00000398640 SLC14A2Q15849 920 aa13.4□□□□□ -0.27
PCDHA11-201ENST00000398640 TSSK4Q6SA08 328 aa13.4□□□□□ -0.27
PCDHA11-201ENST00000398640 OR52R1Q8NGF1 315 aa13.4□□□□□ -0.27
PCDHA11-201ENST00000398640 GLYATL2Q8WU03 294 aa13.4□□□□□ -0.27
PCDHA11-201ENST00000398640 FRS3O43559 492 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 PSMB5P28074 263 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 NR4A2P43354 598 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 PSPHP78330 225 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 PKDCCQ504Y2 493 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 USP36Q9P275 1121 aaKnown RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 PCDH10Q9P2E7 1040 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF705EA8MWA4 302 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 EDIL3O43854 480 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 PABPC4LP0CB38 370 aaKnown RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 EXOSC7Q15024 291 aaKnown RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 COL28A1Q2UY09 1125 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 TBRG1Q3YBR2 411 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ABHD12BQ7Z5M8 362 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 TMEM135Q86UB9 458 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 NETO1Q8TDF5 533 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF775Q96BV0 537 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 FOXN4Q96NZ1 517 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 FEVQ99581 238 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 IL26Q9NPH9 171 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 IGSF5Q9NSI5 407 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 MGAT4CQ9UBM8 478 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 MITFO75030 526 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 OXSR1O95747 527 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 UCHL1P09936 223 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ACPPP15309 386 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 CD68P34810 354 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF789Q5FWF6 425 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 C6orf141Q5SZD1 244 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 C6orf183Q5T699 404 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 SFRP4Q6FHJ7 346 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ACBD7Q8N6N7 88 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 CYB561A3Q8NBI2 242 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 SLC12A9Q9BXP2 914 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ENKD1Q9H0I2 346 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF160Q9HCG1 818 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 POT1Q9NUX5 634 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 PAK1IP1Q9NWT1 392 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ERVK13-1Q9NX77 482 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 TMEM9Q9P0T7 183 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 AP1M2Q9Y6Q5 423 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 CRTAPO75718 401 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 MELKQ14680 651 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 SPHARQ15513 63 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 UGT2A3Q6UWM9 527 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 TMEM184AQ6ZMB5 413 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 OR8J1Q8NGP2 316 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 ZC3HAV1LQ96H79 300 aaKnown RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 CCM2LQ9NUG4 571 aaPredicted RBP13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 MKS1Q9NXB0 559 aa13.39□□□□□ -0.27
PCDHA11-201ENST00000398640 TRAPPC13A5PLN9 417 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 E7ESA3 106 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 USF2Q15853 346 aaPredicted RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 GTDC1Q4AE62 458 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 FAM109BQ6ICB4 259 aaPredicted RBP13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 KANSL1Q7Z3B3 1105 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 MS4A4EQ96PG1 132 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 MGLLQ99685 303 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 FAM118AQ9NWS6 357 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 FBXO45P0C2W1 286 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 H2AFB2P0C5Z0 115 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 MSL3P1P0C860 447 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 GABRA2P47869 451 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 ZNF252P-AS1Q0IIN9 211 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 FOXC1Q12948 553 aa13.38□□□□□ -0.27
PCDHA11-201ENST00000398640 ASRGL1Q7L266 308 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms