RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 EMC9Q9Y3B6 208 aa10.75□□□□□ -0.69
TFF3-202ENST00000398431 POLR3HQ9Y535 204 aaPredicted RBP10.75□□□□□ -0.69
TFF3-202ENST00000398431 SONP18583 2426 aaKnown RBP10.75□□□□□ -0.69
TFF3-202ENST00000398431 ATRQ13535 2644 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 ABCA1O95477 2261 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 A0A1W2PRB8 838 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 NPIPB8E9PQR5 432 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 G3V2L1 256 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 NDUFAB1O14561 156 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 EFNA2O43921 213 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 OXSR1O95747 527 aaPredicted RBP10.74□□□□□ -0.69
TFF3-202ENST00000398431 PSMB1P20618 241 aaKnown RBP10.74□□□□□ -0.69
TFF3-202ENST00000398431 MDH1P40925 334 aaKnown RBP10.74□□□□□ -0.69
TFF3-202ENST00000398431 PSMD4P55036 377 aaKnown RBP10.74□□□□□ -0.69
TFF3-202ENST00000398431 ATP5J2P56134 94 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 CTBP2P56545 445 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 RAC1P63000 192 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 ZNF844Q08AG5 666 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 PLPPR5Q32ZL2 321 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 TTMPQ5BVD1 217 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 CPTPQ5TA50 214 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 ADAM5Q6NVV9 412 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 NOXRED1Q6NXP6 359 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 BEND4Q6ZU67 534 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 LCA5Q86VQ0 697 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 WFDC8Q8IUA0 241 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 SLC22A9Q8IVM8 553 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 WDR75Q8IWA0 830 aaKnown RBP10.74□□□□□ -0.69
TFF3-202ENST00000398431 MAPK1IP1LQ8NDC0 245 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 MZB1Q8WU39 189 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 SLC9A6Q92581 669 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 AKAP1Q92667 903 aaKnown RBP eCLIP10.74□□□□□ -0.69
TFF3-202ENST00000398431 TMEM109Q9BVC6 243 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 ACTR6Q9GZN1 396 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 CENPHQ9H3R5 247 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 CXorf56Q9H5V9 222 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 PPCSQ9HAB8 311 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 MIEF1Q9NQG6 463 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 MED17Q9NVC6 651 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 NTMQ9P121 344 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 EMCNQ9ULC0 261 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 LAMP3Q9UQV4 416 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 STK38LQ9Y2H1 464 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 CR1P17927 2039 aa10.74□□□□□ -0.69
TFF3-202ENST00000398431 CADP27708 2225 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 A0A087WZY1 265 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 C7orf72A4D263 438 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 TTC36A6NLP5 189 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 GOLGA8RI6L899 631 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 TNFSF11O14788 317 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 NDUFB5O43674 189 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 GCM2O75603 506 aaPredicted RBP10.73□□□□□ -0.69
TFF3-202ENST00000398431 NTN1O95631 604 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 PLGP00747 810 aaPredicted RBP10.73□□□□□ -0.69
TFF3-202ENST00000398431 THBS1P07996 1170 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 NGFRP08138 427 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 SOD3P08294 240 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 DANCRP0C864 163 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 ACP2P11117 423 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 PRPS2P11908 318 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 ZNF17P17021 662 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 SHC1P29353 583 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 NTSP30990 170 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 SLC18A2Q05940 514 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 ZNHIT3Q15649 155 aaPredicted RBP10.73□□□□□ -0.69
TFF3-202ENST00000398431 TSC22D1Q15714 1073 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 ZNF385BQ569K4 471 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 EXOSC6Q5RKV6 272 aaKnown RBP10.73□□□□□ -0.69
TFF3-202ENST00000398431 PPP4R4Q6NUP7 873 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 GABRG1Q8N1C3 465 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 GATSQ8NAP1 163 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 SLC16A11Q8NCK7 471 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 OR2V1Q8NHB1 315 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 GPR151Q8TDV0 419 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 ACTRT2Q8TDY3 377 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 EPS8L3Q8TE67 593 aaKnown RBP10.73□□□□□ -0.69
TFF3-202ENST00000398431 ROBO4Q8WZ75 1007 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 OSTF1Q92882 214 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 NEUROG1Q92886 237 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 CIDECQ96AQ7 238 aaPredicted RBP10.73□□□□□ -0.69
TFF3-202ENST00000398431 RNF145Q96MT1 663 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 C3orf14Q9HBI5 128 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 EQTNQ9NQ60 294 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 GLRX2Q9NS18 164 aa10.73□□□□□ -0.69
TFF3-202ENST00000398431 PAQR5Q9NXK6 330 aaPredicted RBP10.73□□□□□ -0.69
TFF3-202ENST00000398431 PSMC3IPQ9P2W1 217 aaPredicted RBP10.73□□□□□ -0.69
TFF3-202ENST00000398431 MCTS1Q9ULC4 181 aaKnown RBP10.73□□□□□ -0.69
TFF3-202ENST00000398431 ALPK2Q86TB3 2170 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 RNF223E7ERA6 249 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 RSL1D1O76021 490 aaKnown RBP10.72□□□□□ -0.69
TFF3-202ENST00000398431 KCNK2O95069 426 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 KCNH1O95259 989 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 LINGO3P0C6S8 592 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 PYGBP11216 843 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 AGTR1P30556 359 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 FRKP42685 505 aaPredicted RBP10.72□□□□□ -0.69
TFF3-202ENST00000398431 DUSP5Q16690 384 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 CLEC12BQ2HXU8 276 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 KRT71Q3SY84 523 aa10.72□□□□□ -0.69
TFF3-202ENST00000398431 NCMAPQ5T1S8 102 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms