RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 NPIPB9F8W1W9 429 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 ADAM10O14672 748 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 GNB5O14775 395 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 TFPTP0C1Z6 253 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 HPGDP15428 266 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 GAS1P54826 345 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 CHRNEQ04844 493 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 KRT72Q14CN4 511 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 CYP51A1Q16850 503 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 CMPK2Q5EBM0 449 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 RPS26P11Q5JNZ5 115 aaPredicted RBP23.17■■□□□ 1.3
U2AF1-203ENST00000398137 HMGN2P46Q86SG4 172 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 PACS2Q86VP3 889 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 GHDCQ8N2G8 530 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 ZNF614Q8N883 585 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 TMEM19Q96HH6 336 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 TTTY12Q9BZ98 90 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 SLC38A1Q9H2H9 487 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 KAT8Q9H7Z6 458 aaKnown RBP23.17■■□□□ 1.3
U2AF1-203ENST00000398137 MEMO1Q9Y316 297 aa23.17■■□□□ 1.3
U2AF1-203ENST00000398137 CSMD1Q96PZ7 3565 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 SCDO00767 359 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 SLC6A2P23975 617 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 CLK3P49761 638 aaKnown RBP23.16■■□□□ 1.3
U2AF1-203ENST00000398137 ATP12AP54707 1039 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 FNDC7Q5VTL7 733 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 HACD2Q6Y1H2 254 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 LRRC74BQ6ZQY2 392 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 DOLPP1Q86YN1 238 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 ZNF619Q8N2I2 560 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 ZNF527Q8NB42 609 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 NFKBIDQ8NI38 313 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 TMEM41AQ96HV5 264 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 SH3GL1Q99961 368 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 GPATCH1Q9BRR8 931 aaKnown RBP23.16■■□□□ 1.3
U2AF1-203ENST00000398137 HOXD1Q9GZZ0 328 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 ZFP64Q9NPA5 681 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 KCNE5Q9UJ90 142 aa23.16■■□□□ 1.3
U2AF1-203ENST00000398137 KLF2Q9Y5W3 355 aaPredicted RBP23.16■■□□□ 1.3
U2AF1-203ENST00000398137 ALG1L2C9J202 215 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 SNPHO15079 494 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 GLSO94925 669 aaPredicted RBP23.15■■□□□ 1.3
U2AF1-203ENST00000398137 GUSBP08236 651 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 ARAFP10398 606 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 CRISP3P54108 245 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 PPIAP62937 165 aaKnown RBP23.15■■□□□ 1.3
U2AF1-203ENST00000398137 PDZK1Q5T2W1 519 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 OR5M10Q6IEU7 315 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 MTFR2Q6P444 385 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 RPTNQ6XPR3 784 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 BNC2Q6ZN30 1099 aaPredicted RBP23.15■■□□□ 1.3
U2AF1-203ENST00000398137 TRPM8Q7Z2W7 1104 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 OR10A6Q8NH74 314 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 MARVELD3Q96A59 401 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 SAP130Q9H0E3 1048 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 QRSL1Q9H0R6 528 aaKnown RBP23.15■■□□□ 1.3
U2AF1-203ENST00000398137 PIF1Q9H611 641 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 PLSCR2Q9NRY7 297 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 CALML5Q9NZT1 146 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 PPP4R1LQ9P1A2 415 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 FBN2P35556 2912 aa23.15■■□□□ 1.3
U2AF1-203ENST00000398137 NINQ8N4C6 2090 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 C15orf38-AP3S2A0A0A6YYH1 394 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 TFECO14948 347 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-203ENST00000398137 ANGPTL1O95841 491 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 CASP6P55212 293 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 CD226Q15762 336 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 ADRM1Q16186 407 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 C8orf82Q6P1X6 216 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-203ENST00000398137 C3P1Q6ZMU1 363 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 NET1Q7Z628 596 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-203ENST00000398137 ARPINQ7Z6K5 226 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 PTOV1Q86YD1 416 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 DMRTA2Q96SC8 542 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 TREX2Q9BQ50 279 aaPredicted RBP23.14■■□□□ 1.29
U2AF1-203ENST00000398137 TMEM38AQ9H6F2 299 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 ZNF407Q9C0G0 2248 aa23.14■■□□□ 1.29
U2AF1-203ENST00000398137 A0A1B0GTH9 108 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 C5orf58C9J3I9 102 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 ACOT7O00154 380 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 HNRNPRO43390 633 aaKnown RBP23.13■■□□□ 1.29
U2AF1-203ENST00000398137 NDUFB5O43674 189 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 UGT2B17O75795 530 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 RFPL3SP0C7P2 107 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 ESRRAP11474 423 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-203ENST00000398137 CBX1P83916 185 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 CDK6Q00534 326 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 SCARB2Q14108 478 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 GNA13Q14344 377 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 ZNF141Q15928 474 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 MAPK14Q16539 360 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 ZNF630Q2M218 657 aaPredicted RBP23.13■■□□□ 1.29
U2AF1-203ENST00000398137 KLHL26Q53HC5 615 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 TIGD3Q6B0B8 471 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 SLC22A16Q86VW1 577 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 ZZZ3Q8IYH5 903 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 TMEM251Q8N6I4 163 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 WDSUB1Q8N9V3 476 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 OR1J4Q8NGS1 313 aa23.13■■□□□ 1.29
U2AF1-203ENST00000398137 FBXO27Q8NI29 283 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms