RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 UTS2O95399 124 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 PSMG1O95456 288 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 SYNGR4O95473 234 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 PLAUP00749 431 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 TP53P04637 393 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 JUNP05412 331 aaKnown RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 ENO1P06733 434 aaKnown RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 FESP07332 822 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 NGFRP08138 427 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 SNRPAP09012 282 aaKnown RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 PABPC4LP0CB38 370 aaKnown RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF17P17021 662 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 GABRA3P34903 492 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 SLC6A8P48029 635 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 NCBP2P52298 156 aaKnown RBP eCLIP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 PKNOX1P55347 436 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 RPS4XP62701 263 aaKnown RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 SLC7A5Q01650 507 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 KRTAP1-1Q07627 177 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 DMTNQ08495 405 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 CTU2Q2VPK5 515 aaKnown RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 UNC50Q53HI1 259 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 TCHHL1Q5QJ38 904 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF678Q5SXM1 525 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 PDSS1Q5T2R2 415 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 LGSNQ5TDP6 509 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 FAM71E1Q6IPT2 247 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 APOOLQ6UXV4 268 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 ESPNLQ6ZVH7 1005 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF572Q7Z3I7 529 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 ALPK2Q86TB3 2170 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 LCA5Q86VQ0 697 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 GTPBP8Q8N3Z3 284 aaPredicted RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 FAM76AQ8TAV0 307 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 ACTRT2Q8TDY3 377 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 HSD17B8Q92506 261 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 AKAP1Q92667 903 aaKnown RBP eCLIP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 OSTF1Q92882 214 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 AMDHD1Q96NU7 426 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 PAFAH2Q99487 392 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 LMF2Q9BU23 707 aaKnown RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 ACTR6Q9GZN1 396 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 GLIPR2Q9H4G4 154 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 DDX18Q9NVP1 670 aaKnown RBP7.82□□□□□ -1.16
CAPN3-208ENST00000397204 FLRT3Q9NZU0 649 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 LAMP3Q9UQV4 416 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 CADP27708 2225 aa7.82□□□□□ -1.16
CAPN3-208ENST00000397204 ESYT3A0FGR9 886 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 TRIM49D1C9J1S8 452 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 ALG1L2C9J202 215 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 CXCL13O43927 109 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 DLX3O60479 287 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 DANCRP0C864 163 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 ME2P23368 584 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 PSMA4P25789 261 aaKnown RBP7.81□□□□□ -1.16
CAPN3-208ENST00000397204 NTSP30990 170 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 CASQ1P31415 396 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 PRKAA2P54646 552 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 CARD18P57730 90 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 BTKQ06187 659 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 ZNF763Q0D2J5 394 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 LCP2Q13094 533 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 PRSS53Q2L4Q9 553 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 VPS26BQ4G0F5 336 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 SPDYAQ5MJ70 313 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 HMBOX1Q6NT76 420 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 PPP4R4Q6NUP7 873 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 MFSD12Q6NUT3 480 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 TMEM107Q6UX40 140 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 TIFABQ6ZNK6 161 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 HIPK1Q86Z02 1210 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 SLC22A9Q8IVM8 553 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 MMGT1Q8N4V1 131 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 OR10D3Q8NH80 312 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 OR2V1Q8NHB1 315 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 LILRB1Q8NHL6 650 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-208ENST00000397204 CEP70Q8NHQ1 597 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 SMAP2Q8WU79 429 aaPredicted RBP7.81□□□□□ -1.16
CAPN3-208ENST00000397204 DCAKDQ8WVC6 231 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 ZBTB8AQ96BR9 441 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 ADGRG7Q96K78 797 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 TACO1Q9BSH4 297 aaKnown RBP7.81□□□□□ -1.16
CAPN3-208ENST00000397204 IQCGQ9H095 443 aaKnown RBP7.81□□□□□ -1.16
CAPN3-208ENST00000397204 ESRP2Q9H6T0 727 aaKnown RBP7.81□□□□□ -1.16
CAPN3-208ENST00000397204 GRPEL1Q9HAV7 217 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 GP6Q9HCN6 339 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 MIEF1Q9NQG6 463 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 CLEC4AQ9UMR7 237 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 VDAC3Q9Y277 283 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 RNF115Q9Y4L5 304 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 HEATR5AQ86XA9 2040 aa7.81□□□□□ -1.16
CAPN3-208ENST00000397204 PCNX3Q9H6A9 2034 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 A0A0J9YW62 118 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 GXYLT2A0PJZ3 443 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 RNF212BA8MTL3 300 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 POC1B-GALNT4F8VUJ3 575 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 EREGO14944 169 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 NDUFB5O43674 189 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 NKX2-2O95096 273 aa7.8□□□□□ -1.16
CAPN3-208ENST00000397204 TUBBP07437 444 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms