RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 MANSC1Q9H8J5 431 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 L2HGDHQ9H9P8 463 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 MED17Q9NVC6 651 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 DDX18Q9NVP1 670 aaKnown RBP13.26□□□□□ -0.29
SEC13-206ENST00000397102 DMGDHQ9UI17 866 aaKnown RBP13.26□□□□□ -0.29
SEC13-206ENST00000397102 ZNF225Q9UK10 706 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 KCNS2Q9ULS6 477 aa13.26□□□□□ -0.29
SEC13-206ENST00000397102 PLCE1Q9P212 2302 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 TTC36A6NLP5 189 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 ZNF814B7Z6K7 855 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 MANBAO00462 879 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 NDUFB5O43674 189 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 OR4F21O95013 312 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 KCNH1O95259 989 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 JUNP05412 331 aaKnown RBP13.25□□□□□ -0.29
SEC13-206ENST00000397102 PGRP06401 933 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 CSF3P09919 207 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 USF1P22415 310 aaPredicted RBP13.25□□□□□ -0.29
SEC13-206ENST00000397102 TIA1P31483 386 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC13-206ENST00000397102 MAGEA4P43358 317 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 GSTM5P46439 218 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 GZMKP49863 264 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC13-206ENST00000397102 CDH13P55290 713 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 MRPS25P82663 173 aaKnown RBP13.25□□□□□ -0.29
SEC13-206ENST00000397102 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC13-206ENST00000397102 STK11Q15831 433 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 SPIN4Q56A73 249 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 TCHHL1Q5QJ38 904 aaPredicted RBP13.25□□□□□ -0.29
SEC13-206ENST00000397102 FAM166AQ6J272 317 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 Q6ZT83 130 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 IL17RELQ6ZVW7 336 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 LILRA2Q8N149 483 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 POC1BQ8TC44 478 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 C10orf105Q8TEF2 133 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 MUCL1Q96DR8 90 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 TIGARQ9NQ88 270 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 GRHL1Q9NZI5 618 aa13.25□□□□□ -0.29
SEC13-206ENST00000397102 GXYLT2A0PJZ3 443 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 FAM187AA6NFU0 413 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 H7C417 338 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 PRKD3O94806 890 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 OXSR1O95747 527 aaPredicted RBP13.24□□□□□ -0.29
SEC13-206ENST00000397102 IGKV1D-16P01601 117 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 KRT6AP02538 564 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 KRT6BP04259 564 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 YES1P07947 543 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 NGFRP08138 427 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 CHN1P15882 459 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 TSPAN8P19075 237 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 DDCP20711 480 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 HNF1AP20823 631 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 GABRA3P34903 492 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 PAFAH1B1P43034 410 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 KRT6CP48668 564 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 SLC18A2Q05940 514 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 ACSM2AQ08AH3 577 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 SLC29A2Q14542 456 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 TIMM23BQ5SRD1 257 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 FAM120AOSQ5T036 256 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 ACSM2BQ68CK6 577 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 Q6ZSR9 355 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 FCRLAQ7L513 359 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 CDYL2Q8N8U2 506 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 MRRFQ96E11 262 aaKnown RBP13.24□□□□□ -0.29
SEC13-206ENST00000397102 APIPQ96GX9 242 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 DHRS9Q9BPW9 319 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 C1QTNF3Q9BXJ4 246 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 SRXN1Q9BYN0 137 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 ACPTQ9BZG2 426 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 CHODLQ9H9P2 273 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 NPAP1Q9NZP6 1156 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 GRID1Q9ULK0 1009 aa13.24□□□□□ -0.29
SEC13-206ENST00000397102 SLC35F4A4IF30 521 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 E7EQL1 145 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 ZSCAN12O43309 604 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 LYZL6O75951 148 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 IFI6P09912 130 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 ELK4P28324 431 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 SHC1P29353 583 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 NTSP30990 170 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 SFTPDP35247 375 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 MANFP55145 182 aaKnown RBP13.23□□□□□ -0.29
SEC13-206ENST00000397102 SQLEQ14534 574 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 PRSS53Q2L4Q9 553 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 GLE1Q53GS7 698 aaKnown RBP13.23□□□□□ -0.29
SEC13-206ENST00000397102 GALNT18Q6P9A2 607 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 P2RY8Q86VZ1 359 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 FBXL14Q8N1E6 418 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 MUC15Q8N387 334 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 GATSQ8NAP1 163 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 OR4C3Q8NH37 302 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 PIK3R3Q92569 461 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 HTRA1Q92743 480 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 ELP4Q96EB1 424 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 EBPLQ9BY08 206 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 GLIPR2Q9H4G4 154 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 RNF14Q9UBS8 474 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 MGAT4BQ9UQ53 548 aa13.23□□□□□ -0.29
SEC13-206ENST00000397102 SAR1BQ9Y6B6 198 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms