RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 RFX4Q33E94 735 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 JMJD6Q6NYC1 403 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-209ENST00000397036 TBPL2Q6SJ96 375 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 LYPD8Q6UX82 237 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 TMEM179BQ7Z7N9 219 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 MRGPREQ86SM8 312 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 STK32CQ86UX6 486 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 RANBP3LQ86VV4 465 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-209ENST00000397036 MISPQ8IVT2 679 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 IL22RA1Q8N6P7 574 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 VANGL1Q8TAA9 524 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-209ENST00000397036 KIAA1143Q96AT1 154 aaPredicted RBP12.51□□□□□ -0.41
MCF2L-209ENST00000397036 TACO1Q9BSH4 297 aaKnown RBP12.51□□□□□ -0.41
MCF2L-209ENST00000397036 FUZQ9BT04 418 aa12.51□□□□□ -0.41
MCF2L-209ENST00000397036 DNAJB12Q9NXW2 375 aaKnown RBP12.51□□□□□ -0.41
MCF2L-209ENST00000397036 YARS2Q9Y2Z4 477 aaKnown RBP12.51□□□□□ -0.41
MCF2L-209ENST00000397036 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 CLDN24A6NM45 220 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 J3KTA2 159 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 FADS1O60427 444 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 EIF4E2O60573 245 aaKnown RBP12.5□□□□□ -0.41
MCF2L-209ENST00000397036 ANXA8P13928 327 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 HPGDP15428 266 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 OTX2P32243 289 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 ACAA2P42765 397 aaKnown RBP12.5□□□□□ -0.41
MCF2L-209ENST00000397036 SPIBQ01892 262 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 ST3GAL3Q11203 375 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 FAHD1Q6P587 224 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 TMEM81Q6P7N7 255 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 DEF8Q6ZN54 512 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 HMGN2P46Q86SG4 172 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 MARCH9Q86YJ5 346 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 LSMEM1Q8N8F7 131 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 CNOT9Q92600 299 aaKnown RBP12.5□□□□□ -0.41
MCF2L-209ENST00000397036 HGDQ93099 445 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 SECISBP2Q96T21 854 aaKnown RBP12.5□□□□□ -0.41
MCF2L-209ENST00000397036 MCHR1Q99705 422 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 ZNF559Q9BR84 538 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 OSBPL11Q9BXB4 747 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 FBXL4Q9UKA2 621 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 RAB26Q9ULW5 256 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 C15orf41Q9Y2V0 281 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 TESMINQ9Y4I5 508 aa12.5□□□□□ -0.41
MCF2L-209ENST00000397036 PTPRBP23467 1997 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 CDC14CA4D256 554 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 C7orf72A4D263 438 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 FAAHO00519 579 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 DLGAP1O14490 977 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 EI24O14681 340 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 UGT2B11O75310 529 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 CYP7B1O75881 506 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 CSTAP01040 98 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 ACADSP16219 412 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 YAP1P46937 504 aaKnown RBP12.49□□□□□ -0.41
MCF2L-209ENST00000397036 AQP4P55087 323 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 CDH12P55289 794 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 EPS8Q12929 822 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 PIN1Q13526 163 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-209ENST00000397036 IL10RAQ13651 578 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 NTRK2Q16620 822 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 CRTC2Q53ET0 693 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-209ENST00000397036 ZNF613Q6PF04 617 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 OPN5Q6U736 354 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 RPS19BP1Q86WX3 136 aaKnown RBP12.49□□□□□ -0.41
MCF2L-209ENST00000397036 GALNT4Q8N4A0 578 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 GIPC3Q8TF64 312 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 TMCO6Q96DC7 493 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 ALPK1Q96QP1 1244 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 FNDC11Q9BVV2 318 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 TRIM2Q9C040 744 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 LAT2Q9GZY6 243 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 GPN2Q9H9Y4 310 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-209ENST00000397036 ZNF160Q9HCG1 818 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 TMCC3Q9ULS5 477 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 U3KQV3 271 aa12.49□□□□□ -0.41
MCF2L-209ENST00000397036 TRAPPC13A5PLN9 417 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 WWP2O00308 870 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 ZNF354AO60765 605 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-209ENST00000397036 ICOSLGO75144 302 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 CLK3P49761 638 aaKnown RBP12.48□□□□□ -0.41
MCF2L-209ENST00000397036 MLF1P58340 268 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 TAS2R41P59536 307 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 TRAM2Q15035 370 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 ZNF791Q3KP31 576 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-209ENST00000397036 NHSL2Q5HYW2 709 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 ENTPD8Q5MY95 495 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 DCST1Q5T197 706 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 OTUD3Q5T2D3 398 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-209ENST00000397036 KDM4DQ6B0I6 523 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 APOOLQ6UXV4 268 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 TSPYL5Q86VY4 417 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-209ENST00000397036 PRR22Q8IZ63 422 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 SLC5A8Q8N695 610 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 POGLUT1Q8NBL1 392 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 ADAMTS16Q8TE57 1224 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 NXPE2Q96DL1 559 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 RASL10BQ96S79 203 aa12.48□□□□□ -0.41
MCF2L-209ENST00000397036 CCNL2Q96S94 520 aaPredicted RBP12.48□□□□□ -0.41
MCF2L-209ENST00000397036 LIN28AQ9H9Z2 209 aaKnown RBP12.48□□□□□ -0.41
MCF2L-209ENST00000397036 TMEM27Q9HBJ8 222 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms