RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PLEKHA8Q96JA3 519 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 OPALINQ96PE5 141 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 DUSP15Q9H1R2 295 aaPredicted RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 MED17Q9NVC6 651 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 TMEM5Q9Y2B1 443 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 PMF1-BGLAPU3KQ54 211 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 UNC119BA6NIH7 251 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 CLDN25C9JDP6 229 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 NUDT21O43809 227 aaKnown RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 OR2B3O76000 313 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 IGKV1D-16P01601 117 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 IFNA16P05015 189 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 SCG5P05408 212 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 GALNSP34059 522 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 PGDP52209 483 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 PSMD4P55036 377 aaKnown RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 ZP2Q05996 745 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 FUT7Q11130 342 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 KCNAB1Q14722 419 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 SPHARQ15513 63 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 ZSWIM7Q19AV6 140 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 SLC30A6Q6NXT4 461 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 C19orf48Q6RUI8 117 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 ARHGAP22Q7Z5H3 698 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 PROKR2Q8NFJ6 384 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 OR2T33Q8NG76 320 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 FANK1Q8TC84 345 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 FNDC8Q8TC99 324 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 CNOT9Q92600 299 aaKnown RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 CHCHD6Q9BRQ6 235 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 G6PC3Q9BUM1 346 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 TAPBPLQ9BX59 468 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 SLIRPQ9GZT3 109 aaKnown RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 OR51E2Q9H255 320 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 TMEM27Q9HBJ8 222 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 AKIP1Q9NQ31 210 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 FBXO8Q9NRD0 319 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 CUTCQ9NTM9 273 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 GMEB2Q9UKD1 530 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 DTX4Q9Y2E6 619 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 GPR52Q9Y2T5 361 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 TMEM184BQ9Y519 407 aaPredicted RBP13.84□□□□□ -0.19
CBX3-202ENST00000396386 CSNK1G3Q9Y6M4 447 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 PCDH15Q96QU1 1955 aa13.84□□□□□ -0.19
CBX3-202ENST00000396386 A0A1B0GVT2 93 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 TMEM150CB9EJG8 249 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 J3QRK9 145 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 ARHGAP33O14559 1287 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 CDC42EP2O14613 210 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 SURF4O15260 269 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 CKMT1AP12532 417 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 IFI30P13284 250 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 GCGRP47871 477 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 HSD11B2P80365 405 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 RAB40BQ12829 278 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 BIKQ13323 160 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 ZNF141Q15928 474 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 AMZ1Q400G9 498 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 ANKDD1AQ495B1 522 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 C3orf38Q5JPI3 329 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 PLXDC1Q8IUK5 500 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 SLC35F3Q8IY50 421 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 ABCA7Q8IZY2 2146 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 TMCO5AQ8N6Q1 288 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 NANOGP1Q8N7R0 232 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 ANKK1Q8NFD2 765 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 OR4N2Q8NGD1 307 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 PFN4Q8NHR9 129 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 BRIX1Q8TDN6 353 aaKnown RBP13.83□□□□□ -0.2
CBX3-202ENST00000396386 HSPBAP1Q96EW2 488 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 RNFT2Q96EX2 444 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 DPH1Q9BZG8 443 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 OR10A5Q9H207 317 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 FGF20Q9NP95 211 aaPredicted RBP13.83□□□□□ -0.2
CBX3-202ENST00000396386 MRPS18AQ9NVS2 196 aaKnown RBP13.83□□□□□ -0.2
CBX3-202ENST00000396386 DNAJB12Q9NXW2 375 aaKnown RBP13.83□□□□□ -0.2
CBX3-202ENST00000396386 CCDC59Q9P031 241 aaKnown RBP13.83□□□□□ -0.2
CBX3-202ENST00000396386 CLEC2DQ9UHP7 191 aa13.83□□□□□ -0.2
CBX3-202ENST00000396386 MN1Q10571 1320 aaPredicted RBP13.83□□□□□ -0.2
CBX3-202ENST00000396386 CHP2O43745 196 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 DCNP07585 359 aaKnown RBP13.82□□□□□ -0.2
CBX3-202ENST00000396386 MYL12AP19105 171 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 IDUAP35475 653 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 SEPHS1P49903 392 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 PRKCDQ05655 676 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 DOC2BQ14184 412 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 FGFBP1Q14512 234 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 SSX1Q16384 188 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 ATCAYQ86WG3 371 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 OR52L1Q8NGH7 329 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 OR6Q1Q8NGQ2 317 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 C16orf52Q8NHV5 167 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 MCFD2Q8NI22 146 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 RFKQ969G6 155 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 SLC35B4Q969S0 331 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 MVB12AQ96EY5 273 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 SAMD8Q96LT4 415 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 ERVMER34-1Q9H9K5 563 aa13.82□□□□□ -0.2
CBX3-202ENST00000396386 ENAMQ9NRM1 1142 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms