RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CXorf36Q9H7Y0 433 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 RASSF1Q9NS23 344 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 ZNF175Q9Y473 711 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 OTOGQ6ZRI0 2925 aa12.4□□□□□ -0.42
CXCL12-205ENST00000395794 A0A1W2PNV4 684 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 A0A1W2PQD3 144 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 DUXAA6NLW8 204 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 GTPBP1O00178 669 aaKnown RBP12.39□□□□□ -0.43
CXCL12-205ENST00000395794 MSTNO14793 375 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 NUDT14O95848 222 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 DHRS4L1P0CG22 281 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 LBPP18428 481 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 CPOXP36551 454 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 SUCLG1P53597 346 aaKnown RBP12.39□□□□□ -0.43
CXCL12-205ENST00000395794 CLDN15P56746 228 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 CLDN20P56880 219 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 OCRLQ01968 901 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 DAZAP2Q15038 168 aaPredicted RBP12.39□□□□□ -0.43
CXCL12-205ENST00000395794 DCST2Q5T1A1 773 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 PDSS1Q5T2R2 415 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 ANXA8L1Q5VT79 327 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 CAMKMTQ7Z624 323 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 MTERF4Q7Z6M4 381 aaKnown RBP12.39□□□□□ -0.43
CXCL12-205ENST00000395794 ZAR1Q86SH2 424 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 OR5AK3PQ8NH89 298 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 LINC01560Q8TB33 94 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 PHOSPHO1Q8TCT1 267 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 FBXO34Q9NWN3 711 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 PAQR5Q9NXK6 330 aaPredicted RBP12.39□□□□□ -0.43
CXCL12-205ENST00000395794 GALNT8Q9NY28 637 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 NDRG3Q9UGV2 375 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 ARHGAP21Q5T5U3 1957 aa12.39□□□□□ -0.43
CXCL12-205ENST00000395794 FREM3P0C091 2139 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 C7orf72A4D263 438 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 A8MXE2 369 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 SHISA8B8ZZ34 492 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 H0YC42 278 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 RNASET2O00584 256 aaKnown RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 EIF1AYO14602 144 aaKnown RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 CASKO14936 926 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 TNFSF13O75888 250 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 SYNGR4O95473 234 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 PLGP00747 810 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 DNAJA1P31689 397 aaKnown RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 EIF1P41567 113 aaKnown RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 EIF1AXP47813 144 aaKnown RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 TPD52P55327 224 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 HBA1P69905 142 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 MPP2Q14168 576 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 PON3Q15166 354 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 TMEM44Q2T9K0 475 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 TNFAIP8L3Q5GJ75 292 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 EXOSC6Q5RKV6 272 aaKnown RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 OR4F3Q6IEY1 312 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 C6orf120Q7Z4R8 191 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 LRRC34Q8IZ02 419 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 GTPBP8Q8N3Z3 284 aaPredicted RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 METTL25Q8N6Q8 603 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 OR4A15Q8NGL6 344 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 FNDC9Q8TBE3 224 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 NUDT8Q8WV74 236 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 FIG4Q92562 907 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 DACH2Q96NX9 599 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 SLC39A3Q9BRY0 314 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 NUF2Q9BZD4 464 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 C20orf27Q9GZN8 174 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 MED17Q9NVC6 651 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 GPATCH2Q9NW75 528 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 NKIRAS1Q9NYS0 192 aa12.38□□□□□ -0.43
CXCL12-205ENST00000395794 MCTS1Q9ULC4 181 aaKnown RBP12.38□□□□□ -0.43
CXCL12-205ENST00000395794 INTS1Q8N201 2190 aaKnown RBP12.37□□□□□ -0.43
CXCL12-205ENST00000395794 CSMD2Q7Z408 3487 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 RNF103-CHMP3A0A140T963 221 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 PRSS51A0A1B0GVH4 220 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 GOSR1O95249 250 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 AGR2O95994 175 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 AK1P00568 194 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 CD1EP15812 388 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 MATN1P21941 496 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 KCNJ5P48544 419 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 CLNS1AP54105 237 aaKnown RBP12.37□□□□□ -0.43
CXCL12-205ENST00000395794 ATP12AP54707 1039 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 RAC1P63000 192 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 SIRPAP78324 504 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 BST1Q10588 318 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 DPY19L1Q2PZI1 675 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 PLPPR5Q32ZL2 321 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 KLHL26Q53HC5 615 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 ZNF614Q8N883 585 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 OR8J2Q8NGG1 315 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 MGARPQ8TDB4 240 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 ZNF845Q96IR2 970 aaPredicted RBP12.37□□□□□ -0.43
CXCL12-205ENST00000395794 RNF145Q96MT1 663 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 OR7D2Q96RA2 312 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 SORT1Q99523 831 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 EXD2Q9NVH0 621 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 PNPOQ9NVS9 261 aa12.37□□□□□ -0.43
CXCL12-205ENST00000395794 HAO1Q9UJM8 370 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms