RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 CHRNB4P30926 498 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 TIMP3P35625 211 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 ADH7P40394 386 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 CDKN2CP42773 168 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 ATP4BP51164 291 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 POLR2JP52435 117 aaKnown RBP12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 CLDN18P56856 261 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 RPS26P62854 115 aaKnown RBP12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 STX5Q13190 355 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 LACC1Q8IV20 430 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 OR9I1Q8NGQ6 314 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 SFXN2Q96NB2 322 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 PANX1Q96RD7 426 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 INPP5KQ9BT40 448 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 CALHM2Q9HA72 323 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 CHST11Q9NPF2 352 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 POLE3Q9NRF9 147 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 Q9UFV3 132 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 CAMK2AQ9UQM7 478 aa12.09□□□□□ -0.47
HLA-DMA-202ENST00000395303 A0A087WZY1 265 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 C7orf72A4D263 438 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 MBD3L4A6NDZ8 208 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 MBD3L3A6NE82 208 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 MBD3L5A6NJ08 208 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 KDM4EB2RXH2 506 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 RFXANKO14593 260 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 ATP8B1O43520 1251 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 STX11O75558 287 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 TOXO94900 526 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 C1QCP02747 245 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 PEPDP12955 493 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 HPGDP15428 266 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 HK1P19367 917 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 POU3F2P20265 443 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 KHKP50053 298 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 AQP5P55064 265 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 FUT5Q11128 374 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 CD226Q15762 336 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 ZNF141Q15928 474 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 FLYWCH1Q4VC44 716 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 SP5Q6BEB4 398 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 ZNF527Q8NB42 609 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 MBD3L2Q8NHZ7 208 aaPredicted RBP12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 ZFP90Q8TF47 636 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 CA5BP1Q8WTZ4 195 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 RMND5AQ9H871 391 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 SLC52A3Q9NQ40 469 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 EXD2Q9NVH0 621 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 ALKBH4Q9NXW9 302 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 DTNAQ9Y4J8 743 aa12.08□□□□□ -0.48
HLA-DMA-202ENST00000395303 UQCRHLA0A096LP55 91 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 NPIPA5A0A0B4J1W7 369 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 OR2M5A3KFT3 312 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 PRAMEF27A3QJZ7 478 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 NPIPA7E9PJI5 369 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 HMGN4O00479 90 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 HCRTR2O43614 444 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 KIAA0513O60268 411 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 NPIPA8P0DM63 369 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 OR12D1P0DN82 309 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 ZNF17P17021 662 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 HOXB9P17482 250 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 CHI3L1P36222 383 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 STARP49675 285 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 ANXA11P50995 505 aaKnown RBP12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 MVDP53602 400 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 SUMO3P55854 103 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 STX1BP61266 288 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 TFF3Q07654 80 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 RCAN2Q14206 197 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 FREM1Q5H8C1 2179 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 TNFAIP8L2Q6P589 184 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 ZNF621Q6ZSS3 439 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 CCDC71Q8IV32 467 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 FUNDC1Q8IVP5 155 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 ARFGAP2Q8N6H7 521 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 GATSQ8NAP1 163 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 TOR1AIP2Q8NFQ8 470 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 XAGE5Q8WWM1 108 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 ITCHQ96J02 903 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 TREX2Q9BQ50 279 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 TUBA1CQ9BQE3 449 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 PIGQQ9BRB3 760 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 SIKE1Q9BRV8 207 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 ZNF385DQ9H6B1 395 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 MED4Q9NPJ6 270 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 CLCF1Q9UBD9 225 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 KCNE5Q9UJ90 142 aa12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 RPH3AQ9Y2J0 694 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMA-202ENST00000395303 CSMD2Q7Z408 3487 aa12.06□□□□□ -0.48
HLA-DMA-202ENST00000395303 HIVEP1P15822 2718 aa12.06□□□□□ -0.48
HLA-DMA-202ENST00000395303 HSPB2A8KAH6 182 aa12.06□□□□□ -0.48
HLA-DMA-202ENST00000395303 OIP5O43482 229 aa12.06□□□□□ -0.48
HLA-DMA-202ENST00000395303 EIF4E2O60573 245 aaKnown RBP12.06□□□□□ -0.48
HLA-DMA-202ENST00000395303 FCMRO60667 390 aa12.06□□□□□ -0.48
HLA-DMA-202ENST00000395303 DNAJA2O60884 412 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms