RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 CARD18P57730 90 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 FAPQ12884 760 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 GLE1Q53GS7 698 aaKnown RBP18.81■□□□□ 0.6
TRAF4-203ENST00000394925 TMEM201Q5SNT2 666 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 SLC22A9Q8IVM8 553 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 GABRG1Q8N1C3 465 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 POC1BQ8TC44 478 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 ABHD3Q8WU67 409 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 L3HYPDHQ96EM0 354 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 KLHDC3Q9BQ90 382 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 TSPYL1Q9H0U9 437 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 GSTO2Q9H4Y5 243 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 ESRP2Q9H6T0 727 aaKnown RBP18.81■□□□□ 0.6
TRAF4-203ENST00000394925 HHATLQ9HCP6 504 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 NGBQ9NPG2 151 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 WBP11Q9Y2W2 641 aaKnown RBP18.81■□□□□ 0.6
TRAF4-203ENST00000394925 ALPK2Q86TB3 2170 aa18.81■□□□□ 0.6
TRAF4-203ENST00000394925 A0A087WUV0 522 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-203ENST00000394925 A0A1W2PP18 115 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 UBFD1O14562 309 aaKnown RBP18.8■□□□□ 0.6
TRAF4-203ENST00000394925 TLX2O43763 284 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-203ENST00000394925 CD5LO43866 347 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 NKX2-2O95096 273 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 SFTPDP35247 375 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 MAP3K8P41279 467 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 ETF1P62495 437 aaKnown RBP18.8■□□□□ 0.6
TRAF4-203ENST00000394925 TAB1Q15750 504 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 ZNF672Q499Z4 452 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-203ENST00000394925 VPS26BQ4G0F5 336 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 SFRP5Q5T4F7 317 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 NOXRED1Q6NXP6 359 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 TFAP2EQ6VUC0 442 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 NUFIP2Q7Z417 695 aaKnown RBP18.8■□□□□ 0.6
TRAF4-203ENST00000394925 ZAR1Q86SH2 424 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 ATG4DQ86TL0 474 aaPredicted RBP18.8■□□□□ 0.6
TRAF4-203ENST00000394925 HIPK1Q86Z02 1210 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 LILRA2Q8N149 483 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 CCNYL1Q8N7R7 359 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 FBXO30Q8TB52 745 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 ACTRT2Q8TDY3 377 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 IFT81Q8WYA0 676 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 REXO5Q96IC2 774 aaKnown RBP18.8■□□□□ 0.6
TRAF4-203ENST00000394925 EGLN2Q96KS0 407 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 KLHL15Q96M94 604 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 FMO2Q99518 471 aa18.8■□□□□ 0.6
TRAF4-203ENST00000394925 EXOC1LA0A1B0GW35 172 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 ADAM11O75078 769 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 NDUFS7O75251 213 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 IGHV4-39P01824 125 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 NGFRP08138 427 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 IFI6P09912 130 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 PABPC4LP0CB38 370 aaKnown RBP18.79■□□□□ 0.6
TRAF4-203ENST00000394925 HPGDP15428 266 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 SHC1P29353 583 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 CKAP4Q07065 602 aaKnown RBP18.79■□□□□ 0.6
TRAF4-203ENST00000394925 ZNF239Q16600 458 aaKnown RBP18.79■□□□□ 0.6
TRAF4-203ENST00000394925 ANKRD26P1Q6NSI1 321 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 TIFABQ6ZNK6 161 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 IKBIPQ70UQ0 350 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 SZRD1Q7Z422 152 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 TRABD2AQ86V40 505 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 TUSC5Q8IXB3 177 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 C17orf53Q8N3J3 647 aaPredicted RBP18.79■□□□□ 0.6
TRAF4-203ENST00000394925 CDRT4Q8N9R6 151 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 NUP43Q8NFH3 380 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 KBTBD8Q8NFY9 601 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 FAM76AQ8TAV0 307 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 RNF128Q8TEB7 428 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 HSD17B8Q92506 261 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 HOXB13Q92826 284 aaPredicted RBP18.79■□□□□ 0.6
TRAF4-203ENST00000394925 ZBED6CLQ96FA7 236 aaPredicted RBP18.79■□□□□ 0.6
TRAF4-203ENST00000394925 SNX8Q9Y5X2 465 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 NBEAL1Q6ZS30 2694 aa18.79■□□□□ 0.6
TRAF4-203ENST00000394925 PDPK1O15530 556 aa18.78■□□□□ 0.6
TRAF4-203ENST00000394925 KCNK2O95069 426 aa18.78■□□□□ 0.6
TRAF4-203ENST00000394925 ACP2P11117 423 aa18.78■□□□□ 0.6
TRAF4-203ENST00000394925 ADH6P28332 368 aa18.78■□□□□ 0.6
TRAF4-203ENST00000394925 PGGHGQ32M88 737 aa18.78■□□□□ 0.6
TRAF4-203ENST00000394925 CEP70Q8NHQ1 597 aa18.78■□□□□ 0.6
TRAF4-203ENST00000394925 B4GALNT2Q8NHY0 566 aa18.78■□□□□ 0.6
TRAF4-203ENST00000394925 KISS1RQ969F8 398 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-203ENST00000394925 CIDECQ96AQ7 238 aaPredicted RBP18.78■□□□□ 0.6
TRAF4-203ENST00000394925 SRXN1Q9BYN0 137 aa18.78■□□□□ 0.6
TRAF4-203ENST00000394925 GOLGA8RI6L899 631 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 SCDO00767 359 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 CRCPO75575 148 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 ADAP00813 363 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 GCAP28676 217 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 PRIM2P49643 509 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 BSPH1Q075Z2 132 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 RNPS1Q15287 305 aaKnown RBP18.77■□□□□ 0.6
TRAF4-203ENST00000394925 TRIM46Q7Z4K8 759 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 LCA5Q86VQ0 697 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 BANPQ8N9N5 519 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 SLC16A11Q8NCK7 471 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 OR6Y1Q8NGX8 325 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 FAM110BQ8TC76 370 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 OTUB1Q96FW1 271 aaPredicted RBP18.77■□□□□ 0.6
TRAF4-203ENST00000394925 HS6ST2Q96MM7 605 aa18.77■□□□□ 0.6
TRAF4-203ENST00000394925 TIGARQ9NQ88 270 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms