RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 TOR1AIP2Q8NFQ8 470 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 OR14A16Q8NHC5 309 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 RHOXF1Q8NHV9 184 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 ZNF721Q8TF20 911 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 TMIGD2Q96BF3 282 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 POLR2J2Q9GZM3 115 aaKnown RBP11.62□□□□□ -0.55
SSH2-203ENST00000394848 EVA1AQ9H8M9 152 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 APMAPQ9HDC9 416 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.62□□□□□ -0.55
SSH2-203ENST00000394848 SCN3BQ9NY72 215 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 DLL3Q9NYJ7 618 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 TPRKBQ9Y3C4 175 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 IGLV3-12A0A075B6K2 115 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 SYNDIG1LA6NDD5 238 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 EFCAB7A8K855 629 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 H3BN98 237 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 PRKNO60260 465 aaPredicted RBP11.62□□□□□ -0.55
SSH2-203ENST00000394848 FMO6PO60774 539 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 THY1P04216 161 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 CCKBRP32239 447 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 ATP12AP54707 1039 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 PSMD4P55036 377 aaKnown RBP11.62□□□□□ -0.55
SSH2-203ENST00000394848 CDC42P60953 191 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 CSNK2BP67870 215 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 IL11RAQ14626 422 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 OR1Q1Q15612 314 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 DECR1Q16698 335 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 DHRS13Q6UX07 377 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 PRICKLE2Q7Z3G6 844 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 NKAIN4Q8IVV8 208 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 ZSCAN1Q8NBB4 408 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 OR4C3Q8NH37 302 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 GNPDA2Q8TDQ7 276 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 ACOT11Q8WXI4 607 aaPredicted RBP11.62□□□□□ -0.55
SSH2-203ENST00000394848 CNOT9Q92600 299 aaKnown RBP11.62□□□□□ -0.55
SSH2-203ENST00000394848 SGCDQ92629 289 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 ART5Q96L15 291 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 NUDT9Q9BW91 350 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 POLR1BQ9H9Y6 1135 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 IMPAD1Q9NX62 359 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 SLC7A7Q9UM01 511 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
SSH2-203ENST00000394848 TRAPPC13A5PLN9 417 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 NPIPB9F8W1W9 429 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 TMX2-CTNND1H3BSU7 103 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 POLR1CO15160 346 aaPredicted RBP11.61□□□□□ -0.55
SSH2-203ENST00000394848 ABCB7O75027 752 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 BCAS1O75363 584 aaPredicted RBP11.61□□□□□ -0.55
SSH2-203ENST00000394848 WBP4O75554 376 aaKnown RBP11.61□□□□□ -0.55
SSH2-203ENST00000394848 SOX14O95416 240 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 IGFBP1P08833 259 aaPredicted RBP11.61□□□□□ -0.55
SSH2-203ENST00000394848 FGF5P12034 268 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 GSTM3P21266 225 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 SMN1Q16637 294 aaKnown RBP11.61□□□□□ -0.55
SSH2-203ENST00000394848 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.61□□□□□ -0.55
SSH2-203ENST00000394848 ZSWIM7Q19AV6 140 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 FAAH2Q6GMR7 532 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 OVCH1Q7RTY7 1134 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 GRAMD2AQ8IUY3 354 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 P3H2Q8IVL5 708 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 SPARTQ8N0X7 666 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 CACTIN-AS1Q8N1I8 211 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 AGBL5Q8NDL9 886 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 APH1BQ8WW43 257 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 LCORQ96JN0 433 aaPredicted RBP11.61□□□□□ -0.55
SSH2-203ENST00000394848 NODALQ96S42 347 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 GPA33Q99795 319 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 CTRCQ99895 268 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 ZNF559Q9BR84 538 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 ZNF226Q9NYT6 803 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 CCDC88CQ9P219 2028 aa11.61□□□□□ -0.55
SSH2-203ENST00000394848 C2orf92A0A1B0GVN3 265 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 H3BSA7 217 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 NTN1O95631 604 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 ONECUT2O95948 504 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 MT-CO3P00414 261 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 HEXBP07686 556 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 HTR2AP28223 471 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 DCAF7P61962 342 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 ALDH6A1Q02252 535 aaKnown RBP11.6□□□□□ -0.55
SSH2-203ENST00000394848 PLAURQ03405 335 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 PIGFQ07326 219 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 ISXQ2M1V0 245 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 BORAQ6PGQ7 559 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 LANCL3Q6ZV70 420 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 MBOAT2Q6ZWT7 520 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 ZNF540Q8NDQ6 660 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 OR1N1Q8NGS0 311 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 PIGXQ8TBF5 258 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 TMEM255BQ8WV15 326 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 ADIPOR1Q96A54 375 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 HOXD1Q9GZZ0 328 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 NXF5Q9H1B4 397 aaKnown RBP11.6□□□□□ -0.55
SSH2-203ENST00000394848 DUSP21Q9H596 190 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 TMEM27Q9HBJ8 222 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 VCX3AQ9NNX9 186 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 C14orf105Q9NVL8 296 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 PAK1IP1Q9NWT1 392 aaPredicted RBP11.6□□□□□ -0.55
SSH2-203ENST00000394848 COPS7AQ9UBW8 275 aa11.6□□□□□ -0.55
SSH2-203ENST00000394848 TESQ9UGI8 421 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms