RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 TMEM239Q8WW34 195 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 HSPA12BQ96MM6 686 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 HS6ST2Q96MM7 605 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 UBQLN3Q9H347 655 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 LRRN3Q9H3W5 708 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 CACNG2Q9Y698 323 aa15.09■□□□□ 0.01
PCDH1-203ENST00000394536 A0A1W2PS29 197 aa15.08■□□□□ 0.01
PCDH1-203ENST00000394536 SLC22A31A6NKX4 558 aa15.08■□□□□ 0.01
PCDH1-203ENST00000394536 CTSEP14091 401 aa15.08■□□□□ 0.01
PCDH1-203ENST00000394536 HYAL4Q2M3T9 481 aa15.08■□□□□ 0.01
PCDH1-203ENST00000394536 FAM111BQ6SJ93 734 aa15.08■□□□□ 0.01
PCDH1-203ENST00000394536 UBE2Q1Q7Z7E8 422 aa15.08■□□□□ 0.01
PCDH1-203ENST00000394536 TMC8Q8IU68 726 aa15.08■□□□□ 0.01
PCDH1-203ENST00000394536 GPA33Q99795 319 aa15.08■□□□□ 0.01
PCDH1-203ENST00000394536 OTOFQ9HC10 1997 aa15.08■□□□□ 0.01
PCDH1-203ENST00000394536 TRAPPC13A5PLN9 417 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 KAT7O95251 611 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 TEAD1P28347 426 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 VSX2P58304 361 aaPredicted RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 ARHGAP19Q14CB8 494 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 EXOSC7Q15024 291 aaKnown RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 C12orf73Q69YU5 71 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 ASPGQ86U10 573 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 ZNF761Q86XN6 746 aaPredicted RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 MRPL43Q8N983 215 aaKnown RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 SDR9C7Q8NEX9 313 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 TSACCQ96A04 125 aaPredicted RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 CNRIP1Q96F85 164 aaPredicted RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 C19orf43Q9BQ61 176 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 LOC285556D6RIA3 1793 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 TRPM6Q9BX84 2022 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 TRDV1A0A1B0GX56 115 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 NPC1O15118 1278 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 HOXB3P14651 431 aaPredicted RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 CCR6P51684 374 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 OR10A3P58181 314 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 PLCZ1Q86YW0 608 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 SAMD14Q8IZD0 417 aaPredicted RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 ZBP1Q9H171 429 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 SLC25A18Q9H1K4 315 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 OR52A5Q9H2C5 316 aa15.08■□□□□ 0
PCDH1-203ENST00000394536 MBNL1Q9NR56 388 aaKnown RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 WSB2Q9NYS7 404 aaPredicted RBP15.08■□□□□ 0
PCDH1-203ENST00000394536 TMEM129A0AVI4 362 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 A8MVJ9 347 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 FMO6PO60774 539 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 ALX3O95076 343 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 IFNA7P01567 189 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 HIST1H2ABP04908 130 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 MLLT3P42568 568 aaPredicted RBP15.07■□□□□ 0
PCDH1-203ENST00000394536 CST6Q15828 149 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 PRRT3Q5FWE3 981 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 HIST3H2AQ7L7L0 130 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 GDF7Q7Z4P5 450 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 ACOT12Q8WYK0 555 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 HIST1H2ACQ93077 130 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 BPIFA2Q96DR5 249 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 MIXL1Q9H2W2 232 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 OR51J1Q9H342 316 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 PLEKHB1Q9UF11 243 aaPredicted RBP15.07■□□□□ 0
PCDH1-203ENST00000394536 GPR55Q9Y2T6 319 aaPredicted RBP15.07■□□□□ 0
PCDH1-203ENST00000394536 PCDHGB7Q9Y5F8 929 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 A0A0B4J203 849 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 RNF13O43567 381 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 TSPAN9O75954 239 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 LIMS3P0CW19 117 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 LIMS4P0CW20 117 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 GDI1P31150 447 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 EVX1P49640 407 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 HCCSP53701 268 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 CLDN12P56749 244 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 ZNF542PQ5EBM4 170 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 PRSS45Q7RTY3 260 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 FTMTQ8N4E7 242 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 MOAP1Q96BY2 351 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 ELP4Q96EB1 424 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 SIPA1Q96FS4 1042 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 EPHX3Q9H6B9 360 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 TAS2R10Q9NYW0 307 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 AGR2O95994 175 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 PEPDP12955 493 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 PRKCAP17252 672 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 TPBGQ13641 420 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 HSD17B12Q53GQ0 312 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 C1orf94Q6P1W5 598 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 LYPD4Q6UWN0 246 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 JAZF1Q86VZ6 243 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 PRSS58Q8IYP2 241 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 TMEM99Q8N816 258 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 ZNF563Q8TA94 476 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 SLC25A19Q9HC21 320 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 SIDT1Q9NXL6 827 aaKnown RBP15.07■□□□□ 0
PCDH1-203ENST00000394536 OR6C2Q9NZP2 312 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 CHST2Q9Y4C5 530 aa15.07■□□□□ 0
PCDH1-203ENST00000394536 SLC9B1P1A6NJY1 282 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ANXA2P2A6NMY6 339 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 M0R233 179 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 FZD7O75084 574 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 SERPINA3P01011 423 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ANXA2P07355 339 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms