RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TMEM247A6NEH6 219 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 WIPF3A6NGB9 483 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 FIGNL2A6NMB9 653 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 GMFGO60234 142 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 KIAA0513O60268 411 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 WDR1O75083 606 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 UGT2B17O75795 530 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 ZIC2O95409 532 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 H6PDO95479 791 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 HOXD4P09016 255 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 GABRA1P14867 456 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 HOXB9P17482 250 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 TCEA1P23193 301 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 ADSLP30566 484 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 DSTNP60981 165 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 GNGT1P63211 74 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 CHRNEQ04844 493 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 CRYZQ08257 329 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 FUT5Q11128 374 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 KLF10Q13118 480 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 RGNQ15493 299 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 CD226Q15762 336 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 GLYR1Q49A26 553 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 PDZK1Q5T2W1 519 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 TYW3Q6IPR3 259 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 ENPP6Q6UWR7 440 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 FRRS1Q6ZNA5 592 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 CPLX4Q7Z7G2 160 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 PM20D2Q8IYS1 436 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 ZNF619Q8N2I2 560 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 DPP10Q8N608 796 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 ANKFN1Q8N957 763 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 B4GALNT2Q8NHY0 566 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 SFXN2Q96NB2 322 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 MTHFD2LQ9H903 347 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 SLC25A37Q9NYZ2 338 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 P2RX2Q9UBL9 471 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 USP9XQ93008 2570 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 A0A087WZY1 265 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 SERINC4A6NH21 518 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 EVPLLA8MZ36 301 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 FAM47E-STBD1D6RA91 191 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 HCRTR2O43614 444 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 CHMP24386 653 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 ACVR2AP27037 513 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 RNF144AP50876 292 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 GFRA1P56159 465 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 FADDQ13158 208 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 GNA13Q14344 377 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 SF3B4Q15427 424 aaKnown RBP eCLIP17.23■□□□□ 0.356e-8■■■■□ 19.7
PDLIM7-204ENST00000393546 MAPRE2Q15555 327 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 DLEU7Q6UYE1 221 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 SPATA21Q7Z572 469 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 MSRB3Q8IXL7 192 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 PHF10Q8WUB8 498 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 PMM1Q92871 262 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 CCDC120Q96HB5 630 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 FAM107BQ9H098 131 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 CALML5Q9NZT1 146 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 VAPAQ9P0L0 249 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 KCNE5Q9UJ90 142 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 CARD8Q9Y2G2 431 aa17.23■□□□□ 0.35
PDLIM7-204ENST00000393546 AHRRA9YTQ3 701 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 EIF4E2O60573 245 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 CCDC22O60826 627 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 ZG16O60844 167 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 TNFRSF21O75509 655 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 CHRM4P08173 479 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 PTGER4P35408 488 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 ADH7P40394 386 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 P2RX1P51575 399 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 ZNF41P51814 821 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 SMSP52788 366 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 ZNF117Q03924 483 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 RAET1LQ5VY80 246 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 EIF3MQ7L2H7 374 aaKnown RBP17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 DHDDSQ86SQ9 333 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 ZG16BQ96DA0 208 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 WDYHV1Q96HA8 205 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 DMRTA2Q96SC8 542 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 PIGQQ9BRB3 760 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 PRDM14Q9GZV8 571 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 SLC38A1Q9H2H9 487 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 CORO2BQ9UQ03 480 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 CAMK2AQ9UQM7 478 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 GMEB1Q9Y692 573 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 LRRK2Q5S007 2527 aa17.22■□□□□ 0.35
PDLIM7-204ENST00000393546 TRBV5-3A0A0A0MS03 114 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 LINC01387J3KSC0 135 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 SLC22A2O15244 555 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 ZNF264O43296 627 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 CSTAP01040 98 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 TFPTP0C1Z6 253 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 UBL4AP11441 157 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 CPN1P15169 458 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 DRD4P21917 467 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 CRISP3P54108 245 aa17.21■□□□□ 0.35
PDLIM7-204ENST00000393546 B3GALT5-AS1P59052 145 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms