RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 COL26A1Q96A83 441 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 CREB3L1Q96BA8 519 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 PAWRQ96IZ0 340 aaKnown RBP17.53■□□□□ 0.4
CBX1-202ENST00000393408 ENKD1Q9H0I2 346 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 CACYBPQ9HB71 228 aaKnown RBP17.53■□□□□ 0.4
CBX1-202ENST00000393408 MOSPD1Q9UJG1 213 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 STON1Q9Y6Q2 735 aa17.53■□□□□ 0.4
CBX1-202ENST00000393408 INMT-MINDY4F8WBC2 141 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 BHLHE40O14503 412 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 ZNF888P0CJ79 500 aaPredicted RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 DUSP8Q13202 625 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 DUSP5Q16690 384 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 WDR88Q6ZMY6 472 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 LRRC28Q86X40 367 aaPredicted RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 KISS1RQ969F8 398 aaPredicted RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 ARMC5Q96C12 935 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 TBX5Q99593 518 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 HCAR1Q9BXC0 346 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 PPIL3Q9H2H8 161 aaKnown RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 GALNT9Q9HCQ5 603 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 SIDT1Q9NXL6 827 aaKnown RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 TRAPPC13A5PLN9 417 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 PLOD3O60568 738 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 KCNJ13O60928 360 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 PRG2P13727 222 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 MAKP20794 623 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 THBS2P35442 1172 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 GNG2P59768 71 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 TNFRSF17Q02223 184 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 GPR176Q14439 515 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 CLPPQ16740 277 aaPredicted RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 EIPR1Q53HC9 387 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 RANBP3LQ86VV4 465 aaPredicted RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 OR2L13Q8N349 312 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 AHCYL2Q96HN2 611 aaKnown RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 GFM1Q96RP9 751 aaKnown RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 SDF2Q99470 211 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 GTPBP2Q9BX10 602 aaKnown RBP17.52■□□□□ 0.4
CBX1-202ENST00000393408 HDHD2Q9H0R4 259 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 TRPV5Q9NQA5 729 aa17.52■□□□□ 0.4
CBX1-202ENST00000393408 SCAMP1O15126 338 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 NARSO43776 548 aaKnown RBP17.51■□□□□ 0.39
CBX1-202ENST00000393408 LANCL1O43813 399 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 KAT7O95251 611 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 THBS1P07996 1170 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 TBXA2RP21731 343 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 HTR2AP28223 471 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 SHC1P29353 583 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 GALEQ14376 348 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 CCNJQ5T5M9 372 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 PRPF38BQ5VTL8 546 aaKnown RBP17.51■□□□□ 0.39
CBX1-202ENST00000393408 OR4M1Q8NGD0 313 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 OR52L1Q8NGH7 329 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 KCTD12Q96CX2 325 aaKnown RBP17.51■□□□□ 0.39
CBX1-202ENST00000393408 HS6ST2Q96MM7 605 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 CD180Q99467 661 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 KIR3DX1Q9H7L2 352 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 TRIM36Q9NQ86 728 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 ENAMQ9NRM1 1142 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 DAPL1A0PJW8 107 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 PRR23AA6NEV1 266 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 ERVH48-1M5A8F1 160 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 ARHGEF9O43307 516 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 LYPD3O95274 346 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 EIF4EP06730 217 aaKnown RBP17.51■□□□□ 0.39
CBX1-202ENST00000393408 C5AR1P21730 350 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 SLC6A1P30531 599 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 MAPK14Q16539 360 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 VITQ6UXI7 678 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 IL20RBQ6UXL0 311 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 LNX2Q8N448 690 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 OR5W2Q8NH69 310 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 PFN4Q8NHR9 129 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 SLC28A3Q9HAS3 691 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 C20orf141Q9NUB4 165 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 KCMF1Q9P0J7 381 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 C2orf16Q68DN1 1984 aa17.51■□□□□ 0.39
CBX1-202ENST00000393408 PAHP00439 452 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 TFPIP10646 304 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 F8A1P23610 371 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 GJA4P35212 333 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 RFX3P48380 749 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 ATP12AP54707 1039 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 BTG1P62324 171 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 MAB21L1Q13394 359 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 GPR68Q15743 365 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 CADM2Q8N3J6 435 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 OR7G1Q8NGA0 311 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 OR4K14Q8NGD5 310 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 DEDD2Q8WXF8 326 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 AKAP1Q92667 903 aaKnown RBP eCLIP17.5■□□□□ 0.39
CBX1-202ENST00000393408 FGF13Q92913 245 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 NECTIN4Q96NY8 510 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 ATP13A2Q9NQ11 1180 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 DPP7Q9UHL4 492 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 ADH1BP00325 375 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 CD53P19397 219 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 RPS4Y1P22090 263 aaKnown RBP17.5■□□□□ 0.39
CBX1-202ENST00000393408 EVI2BP34910 448 aa17.5■□□□□ 0.39
CBX1-202ENST00000393408 IGFALSP35858 605 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms