RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 CACNB4O00305 520 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC28A1O00337 649 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DCTN6O00399 190 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC33A1O00400 549 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LST1O00453 97 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 IFRD1O00458 451 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GOLIM4O00461 696 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MANBAO00462 879 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BTN3A3O00478 584 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LAD1O00515 517 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FAAHO00519 579 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FCN1O00602 326 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PEX12O00623 359 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PEX7O00628 323 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FBP2O00757 339 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PLPP1O14494 284 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CYB561D2O14569 222 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BPY2O14599 106 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AP3D1O14617 1153 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DNALI1O14645 258 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PRRG1O14668 218 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MEIS2O14770 477 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TNPO2O14787 897 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TNFSF11O14788 317 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HS3ST1O14792 307 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SH2D1BO14796 132 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 IFIT3O14879 490 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TFECO14948 347 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CLGNO14967 610 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KIF3BO15066 747 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MCF2LO15068 1137 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ARPC1BO15143 372 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ARPC2O15144 300 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BET1O15155 118 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 INE1O15225 51 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NPHP1O15259 732 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SURF4O15260 269 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OGTO15294 1046 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ALOX15BO15296 676 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RAD51BO15315 384 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 INPP4BO15327 924 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CHADO15335 359 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BCAT2O15382 392 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STX7O15400 261 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC31A2O15432 143 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NBR2O15453 112 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 P4HA2O15460 535 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GYG2O15488 501 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MAFGO15525 162 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TAPBPO15533 448 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RS1O15537 224 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RNF113AO15541 343 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RRP8O43159 456 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ST8SIA3O43173 380 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NDUFS4O43181 175 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PSMD3O43242 534 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TEX33O43247 280 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 B4GALT5O43286 388 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GPAA1O43292 621 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AQP9O43315 295 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FGF16O43320 207 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EMC8O43402 210 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 COCHO43405 550 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 THAP12O43422 761 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PPIHO43447 177 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SGCEO43556 437 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SYT7O43581 403 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 XPOTO43592 962 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TIMM44O43615 452 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RGS10O43665 173 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TCF21O43680 179 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BUB1O43683 1085 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BUD23O43709 281 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 HTATSF1O43719 755 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ITM2AO43736 263 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PRKAB2O43741 272 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR1F1O43749 312 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SCO2O43819 266 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZBTB14O43829 449 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF73O43830 326 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR2T1O43869 369 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CREB3O43889 395 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CHST1O43916 411 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ORC4O43929 436 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SSX4O60224 188 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SSX5O60225 188 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PLIN1O60240 522 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KIAA0513O60268 411 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LCMT2O60294 686 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR10H3O60404 316 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR7C2O60412 319 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SNX3O60493 162 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RANBP6O60518 1105 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GMDSO60547 372 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NMT2O60551 498 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF4E2O60573 245 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TSPAN3O60637 253 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FCMRO60667 390 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SNX2O60749 519 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DPM1O60762 260 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms