RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 LAMB1P07942 1786 aa12.2□□□□□ -0.46
PTPRN2-203ENST00000389418 DOCK3Q8IZD9 2030 aa12.2□□□□□ -0.46
PTPRN2-203ENST00000389418 RREB1Q92766 1687 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 METAP1P53582 386 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CSNK2A1P68400 391 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 MAP4K2Q12851 820 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 PLEKHN1Q494U1 663 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 LRFN4Q6PJG9 635 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 ZNF611Q8N823 705 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CCL4L1Q8NHW4 92 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 FUNDC2Q9BWH2 189 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CUTCQ9NTM9 273 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 EBF1Q9UH73 591 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 SCGNO76038 276 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 SLCO2B1O94956 709 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 HRGP04196 525 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CPOXP36551 454 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 TFF2Q03403 129 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 TAP2Q03519 686 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 KEAP1Q14145 624 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 AFMIDQ63HM1 303 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 SBSNQ6UWP8 590 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 Q6ZSR9 355 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 ACOT11Q8WXI4 607 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 PITX2Q99697 317 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 FUZQ9BT04 418 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 MEPEQ9NQ76 525 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 USP36Q9P275 1121 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 SLC6A5Q9Y345 797 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 ATP6V1G1O75348 118 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CSF2P04141 144 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 ARNTP27540 789 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 THBS2P35442 1172 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CDKN2CP42773 168 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 RAB38P57729 211 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 SCGB2B2Q4G0G5 96 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CMPK2Q5EBM0 449 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 DCST2Q5T1A1 773 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 ADAMTS16Q8TE57 1224 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 TMEM239Q8WW34 195 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 FCAMRQ8WWV6 532 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CREB3L1Q96BA8 519 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 FAM46AQ96IP4 442 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CCDC115Q96NT0 180 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 NEDD4LQ96PU5 975 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 LYSMD1Q96S90 227 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 POTEKPQ9BYX7 375 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 TEX13DA0A0J9YY54 714 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 TCRBV3S1A0A5B6 114 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 AP1G1O43747 822 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 GALR3O60755 368 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 RBBP9O75884 186 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 IMPA1P29218 277 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 XKRXQ6PP77 449 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 MAVSQ7Z434 540 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 OR8J2Q8NGG1 315 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 METTL8Q9H825 291 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 SLC39A1Q9NY26 324 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CNIH4Q9P003 139 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 SBF2Q86WG5 1849 aa12.19□□□□□ -0.46
PTPRN2-203ENST00000389418 CLCA1A8K7I4 914 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 H0YGG7 62 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 ARF3P61204 181 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 PRKCDQ05655 676 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 ALG10Q5BKT4 473 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 C5orf46Q6UWT4 87 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 ABHD12BQ7Z5M8 362 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 C19orf47Q8N9M1 422 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 TMIGD2Q96BF3 282 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 BORCS8Q96FH0 119 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 MAP3K3Q99759 626 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 MRI1Q9BV20 369 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 NMNAT1Q9HAN9 279 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 AGPAT4Q9NRZ5 378 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 STUB1Q9UNE7 303 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 TFPTP0C1Z6 253 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 S100A1P23297 94 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 GPR18Q14330 331 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 PGM2L1Q6PCE3 622 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 OR4K13Q8NH42 304 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 ARSGQ96EG1 525 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 FOXN4Q96NZ1 517 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 BIRC8Q96P09 236 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 PHOX2BQ99453 314 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 USP22Q9UPT9 525 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 KCNIP3Q9Y2W7 256 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 RAD1O60671 282 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 GNAO1P09471 354 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 HOXB9P17482 250 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 E2F1Q01094 437 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 LEG1Q6P5S2 330 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 SLCO4C1Q6ZQN7 724 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 THAP6Q8TBB0 222 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 KLHL15Q96M94 604 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 TMEM121BQ9BXQ6 578 aaPredicted RBP12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 QRSL1Q9H0R6 528 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 ANKRD10Q9NXR5 420 aa12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 MCTS1Q9ULC4 181 aaKnown RBP12.18□□□□□ -0.46
PTPRN2-203ENST00000389418 UBFD1O14562 309 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms