RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 LSSP48449 732 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 TPMTP51580 245 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 GPR50Q13585 617 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 KCNJ8Q15842 424 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 ARMC4Q5T2S8 1044 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 MRPL2Q5T653 305 aaKnown RBP13.89□□□□□ -0.19
SCFD2-201ENST00000388940 RPL13AP3Q6NVV1 102 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 CXXC5Q7LFL8 322 aaKnown RBP13.89□□□□□ -0.19
SCFD2-201ENST00000388940 NRARPQ7Z6K4 114 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 CPOQ8IVL8 374 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 UBQLNLQ8IYU4 475 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 BBS1Q8NFJ9 593 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 TMEM239Q8WW34 195 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 HOXB13Q92826 284 aaPredicted RBP13.89□□□□□ -0.19
SCFD2-201ENST00000388940 CTHRC1Q96CG8 243 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 HS6ST2Q96MM7 605 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 CD180Q99467 661 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 OR52D1Q9H346 318 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 EVA1BQ9NVM1 165 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 SIDT1Q9NXL6 827 aaKnown RBP13.89□□□□□ -0.19
SCFD2-201ENST00000388940 MAT2BQ9NZL9 334 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 TNFRSF10DQ9UBN6 386 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 KCNE5Q9UJ90 142 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 CSNK1G3Q9Y6M4 447 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 F5P12259 2224 aa13.89□□□□□ -0.19
SCFD2-201ENST00000388940 A0A0J9YY10 115 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 FABP12A6NFH5 140 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 GALR3O60755 368 aaPredicted RBP13.88□□□□□ -0.19
SCFD2-201ENST00000388940 LDB3O75112 727 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 SLC2A10O95528 541 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 PRG2P13727 222 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 NT5EP21589 574 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 UBE2IP63279 158 aaKnown RBP13.88□□□□□ -0.19
SCFD2-201ENST00000388940 ID2Q02363 134 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 ASAH1Q13510 395 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 FAM131AQ6UXB0 335 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 SPATC1Q76KD6 591 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 CA13Q8N1Q1 262 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 COX18Q8N8Q8 333 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 TMEM52Q8NDY8 209 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 DIRAS2Q96HU8 199 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 SECISBP2Q96T21 854 aaKnown RBP13.88□□□□□ -0.19
SCFD2-201ENST00000388940 SYNDIG1Q9H7V2 258 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 CPNE7Q9UBL6 633 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 POLHQ9Y253 713 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 ZNF860A6NHJ4 632 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 BHLHE40O14503 412 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 BRINP1O60477 761 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 TNFP01375 233 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 GUSBP08236 651 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 RNF144AP50876 292 aaPredicted RBP13.88□□□□□ -0.19
SCFD2-201ENST00000388940 OR2B6P58173 313 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 FXYD6P3P58550 94 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 PPP3R1P63098 170 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 FZD5Q13467 585 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 CARTPTQ16568 116 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 ZNF544Q6NX49 715 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 ZNF322Q6U7Q0 402 aaPredicted RBP13.88□□□□□ -0.19
SCFD2-201ENST00000388940 WDR88Q6ZMY6 472 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 Q6ZSR6 202 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 TMPRSS11FQ6ZWK6 438 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 PRSS41Q7RTY9 318 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 LNX2Q8N448 690 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 SYT14Q8NB59 555 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 OR52L1Q8NGH7 329 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 DNAJA4Q8WW22 397 aaPredicted RBP13.88□□□□□ -0.19
SCFD2-201ENST00000388940 SPRYD4Q8WW59 207 aaPredicted RBP13.88□□□□□ -0.19
SCFD2-201ENST00000388940 DPH1Q9BZG8 443 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 HOXD1Q9GZZ0 328 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 TIGARQ9NQ88 270 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 C14orf105Q9NVL8 296 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 MSRAQ9UJ68 235 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 TMEM5Q9Y2B1 443 aa13.88□□□□□ -0.19
SCFD2-201ENST00000388940 A0A1W2PQ09 198 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 OR5K4A6NMS3 321 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 SOCS6O14544 535 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 POLR1CO15160 346 aaPredicted RBP13.87□□□□□ -0.19
SCFD2-201ENST00000388940 LRRTM2O43300 516 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 RCBTB2O95199 551 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 BMP7P18075 431 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 MAKP20794 623 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 TBXA2RP21731 343 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 POU6F2P78424 691 aaPredicted RBP13.87□□□□□ -0.19
SCFD2-201ENST00000388940 NIPAL3Q6P499 406 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 METAP1DQ6UB28 335 aaPredicted RBP13.87□□□□□ -0.19
SCFD2-201ENST00000388940 TMEM92Q6UXU6 159 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 MEPCEQ7L2J0 689 aaKnown RBP13.87□□□□□ -0.19
SCFD2-201ENST00000388940 TMEFF1Q8IYR6 380 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 FANK1Q8TC84 345 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 SOSTQ9BQB4 213 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 RERGLQ9H628 205 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 FBXO34Q9NWN3 711 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 KIR2DS5A0A0G2JLQ3 304 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 A0A0G2JNG1 304 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 KIR2DS3K7RE56 304 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 PEX12O00623 359 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 NKX2-2O95096 273 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 GKN3PP0CG01 181 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 IFI30P13284 250 aa13.87□□□□□ -0.19
SCFD2-201ENST00000388940 PVRP15151 417 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms