RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 UNQ9370/PRO34162Q6UXP9 181 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 UNC5DQ6UXZ4 953 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 FAM47EQ6ZV65 393 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 ARRDC1Q8N5I2 433 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 NAT8LQ8N9F0 302 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 COLGALT1Q8NBJ5 622 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 OR2T33Q8NG76 320 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 UBALD1Q8TB05 177 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 TMEM45BQ96B21 275 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 RMI2Q96E14 147 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 CFAP36Q96G28 342 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 RASL11BQ9BPW5 248 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 RNF126Q9BV68 326 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 CACNG6Q9BXT2 260 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 LHX9Q9NQ69 397 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 RBM28Q9NW13 759 aaKnown RBP1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 TEX264Q9Y6I9 313 aa1.04□□□□□ -2.24
RNU6-1040P-201ENST00000383974 PPIAL4EA0A075B759 164 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 PPIAL4CA0A0B4J2A2 164 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 PPIAL4DF5H284 164 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 CACNB4O00305 520 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 PPIAL4FP0DN26 164 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 FERP16591 822 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 HNF1AP20823 631 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 HOXA9P31269 272 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 SH3BGRP55822 239 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 TSPY1Q01534 308 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 ARFRP1Q13795 201 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 UBE2V2Q15819 145 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 CYBRD1Q53TN4 286 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 LY6G6FQ5SQ64 297 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 PRR9Q5T870 116 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 CLEC4GQ6UXB4 293 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 B3GLCTQ6Y288 498 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 STAC2Q6ZMT1 411 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 PRSS42Q7Z5A4 293 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 PCGF5Q86SE9 256 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 AMZ2Q86W34 360 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 IFNEQ86WN2 208 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 GPBP1Q86WP2 473 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 CCDC36Q8IYA8 594 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 AENQ8WTP8 325 aaKnown RBP1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 HDHD3Q9BSH5 251 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 MAGT1Q9H0U3 335 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 FAM124BQ9H5Z6 455 aaPredicted RBP1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 NUFIP1Q9UHK0 495 aaKnown RBP1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 NRBP1Q9UHY1 535 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 BTNL2Q9UIR0 455 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 RIMS3Q9UJD0 308 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 USP16Q9Y5T5 823 aa1.03□□□□□ -2.24
RNU6-1040P-201ENST00000383974 IQANK1A0A1B0GTG1 560 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 A4D1N5 150 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 FBLL1A6NHQ2 334 aaKnown RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 OR10H3O60404 316 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 ZNF780AO75290 641 aaPredicted RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 TBCAO75347 108 aaKnown RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 KIAA0754O94854 1291 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 SNAPINO95295 136 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 SYNGR4O95473 234 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 HSPA4LO95757 839 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 MOSP00540 346 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 SLC4A1P02730 911 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 RHOXF2BP0C7M4 288 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 PNMTP11086 282 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 SCG2P13521 617 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 UQCRC2P22695 453 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 TMOD1P28289 359 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 PITPNBP48739 271 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 SNU13P55769 128 aaKnown RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 RPL8P62917 257 aaKnown RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 CSNK1G2P78368 415 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 ZP4Q12836 540 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 PKN2Q16513 984 aaKnown RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 CASC10Q5T4H9 136 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 PVRIGQ6DKI7 326 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 LEG1Q6P5S2 330 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 WDR74Q6RFH5 385 aaPredicted RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 ARMCX2Q7L311 632 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 VRK2Q86Y07 508 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 C12orf56Q8IXR9 622 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 RAB7BQ96AH8 199 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 CCDC51Q96ER9 411 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 C5orf30Q96GV9 206 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 ULBP2Q9BZM5 246 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 POLR2J2Q9GZM3 115 aaKnown RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 POLR2J3Q9H1A7 115 aaKnown RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 CNIH4Q9P003 139 aa1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 AKAP7Q9P0M2 348 aaPredicted RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 YTHDF2Q9Y5A9 579 aaKnown RBP1.02□□□□□ -2.25
RNU6-1040P-201ENST00000383974 ZNF705EA8MWA4 302 aaPredicted RBP1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 GFYI3L273 518 aa1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 COX7A1P24310 79 aa1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 CD34P28906 385 aa1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 CCL11P51671 97 aa1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 RBP5P82980 135 aa1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 CDKN3Q16667 212 aa1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 ZNF674Q2M3X9 581 aa1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 ACSF3Q4G176 576 aaPredicted RBP1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 PIGGQ5H8A4 983 aa1.01□□□□□ -2.25
RNU6-1040P-201ENST00000383974 BTNL3Q6UXE8 466 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms