RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 TRIML2Q8N7C3 387 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 FAM83FQ8NEG4 500 aaPredicted RBP8.4□□□□□ -1.06
HMGN1-202ENST00000380747 OR4C3Q8NH37 302 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 NEIL3Q8TAT5 605 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 DUSP19Q8WTR2 217 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 RNF138Q8WVD3 245 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
HMGN1-202ENST00000380747 RAB8BQ92930 207 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 VPS33AQ96AX1 596 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 DTNBP1Q96EV8 351 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 CCDC120Q96HB5 630 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 ITCHQ96J02 903 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 RTN4RQ9BZR6 473 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 OR51I1Q9H343 314 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 UBQLN3Q9H347 655 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 DSN1Q9H410 356 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 SERHL2Q9H4I8 314 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 RMND5AQ9H871 391 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 UBQLN4Q9NRR5 601 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 ALKBH4Q9NXW9 302 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 TAS2R10Q9NYW0 307 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 MED11Q9P086 117 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 MEMO1Q9Y316 297 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 SLC6A5Q9Y345 797 aa8.4□□□□□ -1.06
HMGN1-202ENST00000380747 E9PLN8 166 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 NR5A2O00482 541 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 SOX30O94993 753 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 AGR2O95994 175 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 C1QCP02747 245 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 TROVE2P10155 538 aaKnown RBP eCLIP8.39□□□□□ -1.07
HMGN1-202ENST00000380747 HK1P19367 917 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 TBXA2RP21731 343 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 DPP4P27487 766 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 LCN1P31025 176 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 SRD5A2P31213 254 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 PTGER4P35408 488 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 ZFP36L2P47974 494 aaKnown RBP8.39□□□□□ -1.07
HMGN1-202ENST00000380747 KHKP50053 298 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 SMSP52788 366 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 SQLEQ14534 574 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 FLYWCH1Q4VC44 716 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 C6orf10Q5SRN2 563 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 ATAD3BQ5T9A4 648 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 SP5Q6BEB4 398 aaPredicted RBP8.39□□□□□ -1.07
HMGN1-202ENST00000380747 APOOLQ6UXV4 268 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 MSANTD1Q6ZTZ1 278 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 C16orf62Q7Z3J2 963 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 ZNF614Q8N883 585 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 OR2M3Q8NG83 312 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 GOT1L1Q8NHS2 421 aaPredicted RBP8.39□□□□□ -1.07
HMGN1-202ENST00000380747 PNPT1Q8TCS8 783 aaKnown RBP8.39□□□□□ -1.07
HMGN1-202ENST00000380747 XAGE5Q8WWM1 108 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 NEURL3Q96EH8 262 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 SDF2Q99470 211 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 VKORC1Q9BQB6 163 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 SIKE1Q9BRV8 207 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 TMEM120AQ9BXJ8 343 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 OR2B2Q9GZK3 357 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 HOXD1Q9GZZ0 328 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 TP63Q9H3D4 680 aaPredicted RBP8.39□□□□□ -1.07
HMGN1-202ENST00000380747 PTGES2Q9H7Z7 377 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 EXD2Q9NVH0 621 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 FGFR1OP2Q9NVK5 253 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 TRIM33Q9UPN9 1127 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 RPH3AQ9Y2J0 694 aaPredicted RBP8.39□□□□□ -1.07
HMGN1-202ENST00000380747 KLF2Q9Y5W3 355 aaPredicted RBP8.39□□□□□ -1.07
HMGN1-202ENST00000380747 PKDREJQ9NTG1 2253 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 ABCA2Q9BZC7 2435 aa8.39□□□□□ -1.07
HMGN1-202ENST00000380747 PCNX1Q96RV3 2341 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 SPG11Q96JI7 2443 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 B4DXG7 233 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 ALG1L2C9J202 215 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 ADAM10O14672 748 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 EREGO14944 169 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 STX11O75558 287 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 KRT75O95678 551 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 AK1P00568 194 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 NGFRP08138 427 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 BMP7P18075 431 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 ACVR2AP27037 513 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 MDH1P40925 334 aaKnown RBP8.38□□□□□ -1.07
HMGN1-202ENST00000380747 MRPL19P49406 292 aaKnown RBP8.38□□□□□ -1.07
HMGN1-202ENST00000380747 ANXA11P50995 505 aaKnown RBP8.38□□□□□ -1.07
HMGN1-202ENST00000380747 ATP4BP51164 291 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 ARFIP2P53365 341 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 DSCR4P56555 118 aaPredicted RBP8.38□□□□□ -1.07
HMGN1-202ENST00000380747 ADORA2A-AS1P86434 159 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 CRYZQ08257 329 aaKnown RBP8.38□□□□□ -1.07
HMGN1-202ENST00000380747 C17orf67Q0P5P2 114 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 ART3Q13508 389 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 GPR68Q15743 365 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 ARHGAP11BQ3KRB8 267 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 GTDC1Q4AE62 458 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 GPAT3Q53EU6 434 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 AGKQ53H12 422 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 EMC4Q5J8M3 183 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 C1orf185Q5T7R7 199 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 VASNQ6EMK4 673 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 TMEM211Q6ICI0 200 aa8.38□□□□□ -1.07
HMGN1-202ENST00000380747 SLC2A7Q6PXP3 512 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms