RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 ZNF24P17028 368 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 NDUFS1P28331 727 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 MAT2AP31153 395 aaKnown RBP15.18■□□□□ 0.02
VPS16-203ENST00000380469 SOX9P48436 509 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 CTBP2P56545 445 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 CLDN20P56880 219 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 ENPP2Q13822 863 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 SMARCD3Q6STE5 483 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 CDK20Q8IZL9 346 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 YIPF7Q8N8F6 280 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 NLGN4YQ8NFZ3 816 aaPredicted RBP15.18■□□□□ 0.02
VPS16-203ENST00000380469 KCNJ15Q99712 375 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 PRSS27Q9BQR3 290 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 NDEL1Q9GZM8 345 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 SRMSQ9H3Y6 488 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 MED20Q9H944 212 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 TRIM36Q9NQ86 728 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 SIDT1Q9NXL6 827 aaKnown RBP15.18■□□□□ 0.02
VPS16-203ENST00000380469 KCMF1Q9P0J7 381 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 CHD7Q9P2D1 2997 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 SCN3AQ9NY46 2000 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 FAM86C2PA6NEL3 165 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 B3GALT2O43825 422 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 RCBTB2O95199 551 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 DBIP07108 87 aaKnown RBP15.18■□□□□ 0.02
VPS16-203ENST00000380469 ELK1P19419 428 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 ERP29P30040 261 aaKnown RBP15.18■□□□□ 0.02
VPS16-203ENST00000380469 SIM1P81133 766 aaPredicted RBP15.18■□□□□ 0.02
VPS16-203ENST00000380469 FZD5Q13467 585 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 KLHL12Q53G59 568 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 CCNJQ5T5M9 372 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 ZNF619Q8N2I2 560 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 GRPEL2Q8TAA5 225 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 ZCCHC10Q8TBK6 192 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 TMEM239Q8WW34 195 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 SLC22A18Q96BI1 424 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 OR2M4Q96R27 311 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 TBX5Q99593 518 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 HDHD2Q9H0R4 259 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 TRPV5Q9NQA5 729 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 ING3Q9NXR8 418 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 EXTL2Q9UBQ6 330 aa15.18■□□□□ 0.02
VPS16-203ENST00000380469 URADA6NGE7 173 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 ARHGEF9O43307 516 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 SLC43A1O75387 559 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 IFI30P13284 250 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 F8A1P23610 371 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 TALDO1P37837 337 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 HTRA3P83110 453 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 OR1Q1Q15612 314 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 DEFB134Q4QY38 66 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 YIF1BQ5BJH7 314 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 PRPF38BQ5VTL8 546 aaKnown RBP15.17■□□□□ 0.02
VPS16-203ENST00000380469 ABI3BPQ7Z7G0 1075 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 TMEM99Q8N816 258 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 OR5W2Q8NH69 310 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 MARVELD1Q9BSK0 173 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 PIGUQ9H490 435 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 SFXN1Q9H9B4 322 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 FGF22Q9HCT0 170 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 RPRD1BQ9NQG5 326 aaKnown RBP15.17■□□□□ 0.02
VPS16-203ENST00000380469 TBC1D29Q9UFV1 150 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 TBC1D3DA0A087WVF3 549 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 TBC1D3IA0A087WXS9 549 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 TBC1D3EA0A087X179 549 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 PRSS38A1L453 326 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 ZC3H12DA2A288 527 aaKnown RBP15.17■□□□□ 0.02
VPS16-203ENST00000380469 TBC1D3LB9A6J9 549 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 SLC31A1O15431 190 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 PLRG1O43660 514 aaKnown RBP15.17■□□□□ 0.02
VPS16-203ENST00000380469 STX11O75558 287 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 TBC1D3HP0C7X1 549 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 GKN3PP0CG01 181 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 FAM157BP0CG42 384 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 LAMP2P13473 410 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 PRG2P13727 222 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 CPMP14384 443 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 MAKP20794 623 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 RPS7P62081 194 aaKnown RBP15.17■□□□□ 0.02
VPS16-203ENST00000380469 GALEQ14376 348 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 HBMQ6B0K9 141 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 TBC1D3CQ6IPX1 549 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 RPL13AP3Q6NVV1 102 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 FBXO42Q6P3S6 717 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 USP53Q70EK8 1073 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 LIX1LQ8IVB5 337 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 TBC1D3Q8IZP1 549 aaPredicted RBP15.17■□□□□ 0.02
VPS16-203ENST00000380469 OR10H4Q8NGA5 316 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 PFN4Q8NHR9 129 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 ZFPM2Q8WW38 1151 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 TRIM63Q969Q1 353 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 SCARF2Q96GP6 870 aaPredicted RBP15.17■□□□□ 0.02
VPS16-203ENST00000380469 WACQ9BTA9 647 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 INPP5EQ9NRR6 644 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 KLF15Q9UIH9 416 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 ZNF223Q9UK11 482 aaPredicted RBP15.17■□□□□ 0.02
VPS16-203ENST00000380469 MAU2Q9Y6X3 613 aa15.17■□□□□ 0.02
VPS16-203ENST00000380469 CENPVL1A0A0U1RR11 272 aa15.16■□□□□ 0.02
VPS16-203ENST00000380469 SLC22A31A6NKX4 558 aa15.16■□□□□ 0.02
VPS16-203ENST00000380469 PRR23D1E9PI22 279 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms