RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 GPR4P46093 362 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 CAPZBP47756 277 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 MAZP56270 477 aaKnown RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 STX4Q12846 297 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 FAM53BQ14153 422 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 SOWAHCQ53LP3 525 aaPredicted RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 CLEC12AQ5QGZ9 265 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 MEX3DQ86XN8 651 aaKnown RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 ZNF595Q8IYB9 648 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 ARL14Q8N4G2 192 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 ARHGEF39Q8N4T4 335 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 OR52R1Q8NGF1 315 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 RNFT2Q96EX2 444 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 SLC38A3Q99624 504 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 EXOSC4Q9NPD3 245 aaKnown RBP11.72□□□□□ -0.53
VPS16-202ENST00000380445 BRWD1Q9NSI6 2320 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 NDUFB11Q9NX14 153 aa11.72□□□□□ -0.53
VPS16-202ENST00000380445 TMEM129A0AVI4 362 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 LILRA5A6NI73 299 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 METTL12A8MUP2 240 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 RGS13O14921 159 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 PROS1P07225 676 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 WNT4P56705 351 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 SLC13A2Q13183 592 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 OR1Q1Q15612 314 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 RPL13AP3Q6NVV1 102 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 FIGNL1Q6PIW4 674 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 FAM160A2Q8N612 972 aaPredicted RBP11.71□□□□□ -0.53
VPS16-202ENST00000380445 DOK4Q8TEW6 326 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 ZNF486Q96H40 463 aaPredicted RBP11.71□□□□□ -0.53
VPS16-202ENST00000380445 ZNF559Q9BR84 538 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 LMF2Q9BU23 707 aaKnown RBP11.71□□□□□ -0.53
VPS16-202ENST00000380445 RNF167Q9H6Y7 350 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 TMEM27Q9HBJ8 222 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 ISYNA1Q9NPH2 558 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 H2AFY2Q9P0M6 372 aaPredicted RBP11.71□□□□□ -0.53
VPS16-202ENST00000380445 CRNNQ9UBG3 495 aaPredicted RBP11.71□□□□□ -0.53
VPS16-202ENST00000380445 SSR3Q9UNL2 185 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.53
VPS16-202ENST00000380445 TMEM5Q9Y2B1 443 aa11.71□□□□□ -0.53
VPS16-202ENST00000380445 PEX12O00623 359 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 SURF4O15260 269 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 HCRTR1O43613 425 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 CTNSO60931 367 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 MED26O95402 600 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 CBX7O95931 251 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 HBQ1P09105 142 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 SOX3P41225 446 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 NKX2-5P52952 324 aaPredicted RBP11.71□□□□□ -0.54
VPS16-202ENST00000380445 CDH11P55287 796 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 IFITM3Q01628 133 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 PRKCDQ05655 676 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 ZSWIM7Q19AV6 140 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 PGGHGQ32M88 737 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 FLYWCH1Q4VC44 716 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 GARNL3Q5VVW2 1013 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 SLC30A6Q6NXT4 461 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 ZNF613Q6PF04 617 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 ESX1Q8N693 406 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 POGLUT1Q8NBL1 392 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 OR6C4Q8NGE1 309 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 OR52L1Q8NGH7 329 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 TMEM239Q8WW34 195 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 RIT1Q92963 219 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 CD180Q99467 661 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 HOXD1Q9GZZ0 328 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 NUAK2Q9H093 628 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 GPR52Q9Y2T5 361 aa11.71□□□□□ -0.54
VPS16-202ENST00000380445 A0A0A6YYC8 382 aaPredicted RBP11.7□□□□□ -0.54
VPS16-202ENST00000380445 CENPVL1A0A0U1RR11 272 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 ISPDA4D126 451 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 I3L1I5 382 aaPredicted RBP11.7□□□□□ -0.54
VPS16-202ENST00000380445 GPX5O75715 221 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 KCNK2O95069 426 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 NSA2O95478 260 aaKnown RBP11.7□□□□□ -0.54
VPS16-202ENST00000380445 BMP7P18075 431 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 RACK1P63244 317 aaKnown RBP11.7□□□□□ -0.54
VPS16-202ENST00000380445 CADM4Q8NFZ8 388 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 LMX1AQ8TE12 382 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 HS6ST2Q96MM7 605 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 ZNF578Q96N58 590 aaPredicted RBP11.7□□□□□ -0.54
VPS16-202ENST00000380445 MAP3K3Q99759 626 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 PRSS27Q9BQR3 290 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 PLCL2Q9UPR0 1127 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 SLCO1B1Q9Y6L6 691 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 TRIOBPQ9H2D6 2365 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 SCN2AQ99250 2005 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 UNC119BA6NIH7 251 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 PIP5K1CO60331 668 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 GKN3PP0CG01 181 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 CPEP16870 476 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 DRD5P21918 477 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 ETV5P41161 510 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 NR4A2P43354 598 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 ETV1P50549 477 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 DNASE1L3Q13609 305 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 TCTE1Q5JU00 501 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 NXNL2Q5VZ03 156 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 PLEKHG7Q6ZR37 379 aa11.7□□□□□ -0.54
VPS16-202ENST00000380445 LAPTM4BQ86VI4 370 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms