RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 LUZP4Q9P127 313 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 SLC2A6Q9UGQ3 507 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 KIAA1217Q5T5P2 1943 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 IFITM10A6NMD0 228 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 HMSDA8MTL9 139 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 CCL22O00626 93 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 UBBP0CG47 229 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 TYRP14679 529 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 HOXB6P17509 224 aaKnown RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 S100A7P31151 101 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 STAT5AP42229 794 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 CXCR3P49682 368 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 RAG2P55895 527 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 RPS27AP62979 156 aaKnown RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 UBA52P62987 128 aaKnown RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 SURF1Q15526 300 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 DPYSL2Q16555 572 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ABHD15Q6UXT9 468 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ARMCX2Q7L311 632 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 OR10A7Q8NGE5 316 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 OR6K3Q8NGY3 331 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 FAM120BQ96EK7 910 aaKnown RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 TCTN2Q96GX1 697 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 CAPNS2Q96L46 248 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ZNF354BQ96LW1 612 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 SEC11CQ9BY50 192 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 MFFQ9GZY8 342 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 SERHLQ9NQF3 203 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ZIM2Q9NZV7 527 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 ZNF69Q9UC07 566 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 CD84Q9UIB8 345 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 FLVCR2Q9UPI3 526 aa8.78□□□□□ -1
PTPRA-204ENST00000380393 SPIN1Q9Y657 262 aaPredicted RBP8.78□□□□□ -1
PTPRA-204ENST00000380393 A8MWP6 167 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 SMAD6O43541 496 aaKnown RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 FMO6PO60774 539 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 SLC19A2O60779 497 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 SLC25A27O95847 323 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 MT-ND4P03905 459 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 GKN3PP0CG01 181 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 BMI1P35226 326 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 ARL2P36404 184 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 XKR4Q5GH76 650 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 C10orf91Q5T1B1 145 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 TAPT1Q6NXT6 567 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 SIAH3Q8IW03 269 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 OR52E4Q8NGH9 312 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 METTL21AQ8WXB1 218 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 FAM193BQ96PV7 902 aaPredicted RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 DDA1Q9BW61 102 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 CLN6Q9NWW5 311 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 LSM2Q9Y333 95 aaKnown RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 TRIP11Q15643 1979 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 LOC285556D6RIA3 1793 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 RANBP2P49792 3224 aaKnown RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 DNAJC25-GNG10A0A024R161 153 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 OR14I1A6ND48 311 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 ZNF726A6NNF4 738 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 GABRR3A8MPY1 467 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 MATN3O15232 486 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 HCRTR2O43614 444 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 TCF21O43680 179 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 MSCO60682 206 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 F10P00742 488 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 EPXP11678 715 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 PKMP14618 531 aaKnown RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 LAG3P18627 525 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 RABGGTBP53611 331 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 PNLIPRP2P54317 469 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 F2RL1P55085 397 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 NDUFA6P56556 154 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 OC90Q02509 493 aaPredicted RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 LAMTOR4Q0VGL1 99 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 MLLT11Q13015 90 aaPredicted RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 DYRK1AQ13627 763 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 KIAA0141Q14154 515 aaPredicted RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 C14orf28Q4W4Y0 310 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 C11orf88Q6PI97 169 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 GPR135Q8IZ08 494 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 DEFB106AQ8N104 65 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 CBARPQ8N350 705 aaPredicted RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 OR52N2Q8NGI0 321 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 OR5M1Q8NGP8 315 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 RNASE8Q8TDE3 154 aaKnown RBP8.77□□□□□ -1.01
PTPRA-204ENST00000380393 DUSP19Q8WTR2 217 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 CCDC107Q8WV48 283 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 FUZQ9BT04 418 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 C20orf85Q9H1P6 137 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 ISYNA1Q9NPH2 558 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 C1orf109Q9NX04 203 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 SLC35A3Q9Y2D2 325 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 ASB1Q9Y576 335 aa8.77□□□□□ -1.01
PTPRA-204ENST00000380393 A0A1W2PPQ1 181 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 ADAM10O14672 748 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 SLC25A12O75746 678 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 PTBP3O95758 552 aaKnown RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 ESR1P03372 595 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 PRPS2P11908 318 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 PRPS1L1P21108 318 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms