RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 ACOD1A6NK06 481 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 IFITM10A6NMD0 228 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 KDM4EB2RXH2 506 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 NPIPB9F8W1W9 429 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 KDELR3O43731 214 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SLC19A2O60779 497 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 LILRB3O75022 631 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 ENTPD6O75354 484 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 IFNA2P01563 188 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 PAX1P15863 534 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF14P17017 642 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 PTPN6P29350 595 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 NOS3P29474 1203 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CEACAM6P40199 344 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 LSM6P62312 80 aaKnown RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 SURF2Q15527 256 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 PLK5Q496M5 336 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 LYPLAL1Q5VWZ2 237 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 MRNIPQ6NTE8 343 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CLEC9AQ6UXN8 241 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 NHLRC1Q6VVB1 395 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 PIM3Q86V86 326 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF280BQ86YH2 543 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SIAH3Q8IW03 269 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 LAS2Q8IYD9 372 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 PROKR2Q8NFJ6 384 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 OR5T3Q8NGG3 340 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 OR6K3Q8NGY3 331 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SPATA22Q8NHS9 363 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF558Q96NG5 402 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 UBL7Q96S82 380 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 PAAF1Q9BRP4 392 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 C20orf85Q9H1P6 137 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 MRPS30Q9NP92 439 aaKnown RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 ASCL3Q9NQ33 180 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CLN6Q9NWW5 311 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 FLVCR2Q9UPI3 526 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 GAB2Q9UQC2 676 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 RUVBL1Q9Y265 456 aaKnown RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 MBTPS2O43462 519 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CRTAPO75718 401 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 OR2A4O95047 310 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 OTCP00480 354 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CRHP06850 196 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SNRPCP09234 159 aaKnown RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 OR8G3PP0DMU2 310 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 TACR2P21452 398 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 MSX1P28360 303 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SHC1P29353 583 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SLC6A4P31645 630 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 KIR3DL2P43630 455 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 VASPP50552 380 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 PKIAP61925 76 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 FABP5Q01469 135 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 GAMTQ14353 236 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 OR4D1Q15615 310 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 FAM174BQ3ZCQ3 159 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 HECTD2Q5U5R9 776 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SLC30A6Q6NXT4 461 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 MZT2AQ6P582 158 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 B3GLCTQ6Y288 498 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CFAP206Q8IYR0 622 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CPXM2Q8N436 756 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SPICQ8N5J4 248 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 FBXO22Q8NEZ5 403 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 DBF4BQ8NFT6 615 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 OR1S2Q8NGQ3 325 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SLC39A7Q92504 469 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 RAB3CQ96E17 227 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 C14orf79Q96F83 325 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 LRFN5Q96NI6 719 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 OR2A7Q96R45 310 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 OR4K3Q96R72 315 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 MGME1Q9BQP7 344 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 CPPED1Q9BRF8 314 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 FAM117AQ9C073 453 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SMOC1Q9H4F8 434 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 NKIRAS2Q9NYR9 191 aa7□□□□□ -1.29
CDKL5-201ENST00000379989 SPIN1Q9Y657 262 aaPredicted RBP7□□□□□ -1.29
CDKL5-201ENST00000379989 FXYD6-FXYD2A0A087WZ82 144 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 OR6C76A6NM76 312 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 PRR23D1E9PI22 279 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 BCAT2O15382 392 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 RRP8O43159 456 aaKnown RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 PIP5K1CO60331 668 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 EIF4E2O60573 245 aaKnown RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SOD1P00441 154 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 MT-ND4P03905 459 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 RHOP08100 348 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SBK2P0C263 348 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 PRR23D2P0DMB1 279 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 GPR3P46089 330 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 CSNK1EP49674 416 aaKnown RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 CDKN2DP55273 166 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SRSF3P84103 164 aaKnown RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 GLO1Q04760 184 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 C10orf120Q5SQS8 335 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ZDHHC20Q5W0Z9 365 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 PTCHD4Q6ZW05 846 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 STK40Q8N2I9 435 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms