RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 C1orf189Q5VU69 101 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 FCRLBQ6BAA4 426 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 P4HA3Q7Z4N8 544 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 PHC2Q8IXK0 858 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 TBC1D15Q8TC07 691 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ZBP1Q9H171 429 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 SYT4Q9H2B2 425 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 NUFIP1Q9UHK0 495 aaKnown RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 TOGARAM1Q9Y4F4 1720 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 F5H0A9 414 aaPredicted RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 IGLV3-27P01718 113 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 PET100P0DJ07 73 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 UBL4AP11441 157 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 LHCGRP22888 699 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 GRK5P34947 590 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 MAN2A2P49641 1150 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 NR0B1P51843 470 aaKnown RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 CTBP2P56545 445 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ERVFC1P60507 584 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 HSD11B2P80365 405 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 PLP2Q04941 152 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ILKQ13418 452 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 MRPL58Q14197 206 aaKnown RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 LRRC37A5PQ49AS3 106 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 FAM78AQ5JUQ0 283 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 CCNJQ5T5M9 372 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 HES5Q5TA89 166 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ZC3H14Q6PJT7 736 aaKnown RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 EGFL6Q8IUX8 553 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 GPR148Q8TDV2 347 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 FAM46BQ96A09 425 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 TRIM43Q96BQ3 446 aaPredicted RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 PDFQ9HBH1 243 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 C2orf42Q9NWW7 574 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 AK6Q9Y3D8 172 aaKnown RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 NAALAD2Q9Y3Q0 740 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 FAM183AA6NL82 134 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 C17orf105B2RV13 164 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 NPPBP16860 134 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 CCNOP22674 350 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 FNTBP49356 437 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 KCNJ10P78508 379 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 NFATC4Q14934 902 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 FAM76BQ5HYJ3 339 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 WDR53Q7Z5U6 358 aaPredicted RBP10.6□□□□□ -0.71
RPGR-203ENST00000378505 CHTF18Q8WVB6 975 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 NEURL3Q96EH8 262 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 OR1F2PQ96R84 312 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 BTBD2Q9BX70 525 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 TMEM38AQ9H6F2 299 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 CXorf36Q9H7Y0 433 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 FKBP14Q9NWM8 211 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 KCMF1Q9P0J7 381 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 CPNE7Q9UBL6 633 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 NUP50Q9UKX7 468 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 ERVK-19Q9WJR5 959 aa10.6□□□□□ -0.71
RPGR-203ENST00000378505 TRAV18A0A075B6X5 111 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 A0A1B0GVC2 190 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.59□□□□□ -0.71
RPGR-203ENST00000378505 A0A1W2PQ09 198 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 HSPA12AO43301 675 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 AGTR1P30556 359 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 PRSS3P35030 304 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 RSPO2Q6UXX9 243 aaPredicted RBP10.59□□□□□ -0.71
RPGR-203ENST00000378505 MEPCEQ7L2J0 689 aaKnown RBP10.59□□□□□ -0.71
RPGR-203ENST00000378505 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 PARP16Q8N5Y8 322 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 NAXEQ8NCW5 288 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 SDR9C7Q8NEX9 313 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 OR13C3Q8NGS6 347 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 OR2T35Q8NGX2 323 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 ZNF417Q8TAU3 575 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 PITX2Q99697 317 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 ZNF350Q9GZX5 532 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.59□□□□□ -0.71
RPGR-203ENST00000378505 ZNF700Q9H0M5 742 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 OR10A4Q9H209 315 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 SACM1LQ9NTJ5 587 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 ZNF443Q9Y2A4 671 aaPredicted RBP10.59□□□□□ -0.71
RPGR-203ENST00000378505 FAM171A2A8MVW0 826 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 VNN2O95498 520 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 JUNBP17275 347 aaPredicted RBP10.59□□□□□ -0.71
RPGR-203ENST00000378505 NUDT1P36639 197 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 CHRFAM7AQ494W8 412 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 BCL7AQ4VC05 210 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 OR52R1Q8NGF1 315 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 SLC6A7Q99884 636 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 LMF2Q9BU23 707 aaKnown RBP10.59□□□□□ -0.71
RPGR-203ENST00000378505 BCORQ6W2J9 1755 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 SEC14L2O76054 403 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 PVRP15151 417 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 ARRB2P32121 409 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 AGAP6Q5VW22 663 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 ANKRD54Q6NXT1 300 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 ADAMTSL4Q6UY14 1074 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 ZNF767PQ75MW2 155 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 BEST3Q8N1M1 668 aa10.59□□□□□ -0.71
RPGR-203ENST00000378505 LILRA3Q8N6C8 439 aaPredicted RBP10.59□□□□□ -0.71
RPGR-203ENST00000378505 MFSD9Q8NBP5 474 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms