RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SUMO3P55854 103 aaPredicted RBP12.04□□□□□ -0.48
CKAP2-202ENST00000378034 MAPK11Q15759 364 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 CD226Q15762 336 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 EIF3MQ7L2H7 374 aaKnown RBP12.04□□□□□ -0.48
CKAP2-202ENST00000378034 TREML1Q86YW5 311 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 CMIPQ8IY22 773 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 OR8J3Q8NGG0 315 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 LRRC37BQ96QE4 947 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 SPATA9Q9BWV2 254 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 IKZF5Q9H5V7 419 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 EFCAB1Q9HAE3 211 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.04□□□□□ -0.48
CKAP2-202ENST00000378034 TAS2R10Q9NYW0 307 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 MED11Q9P086 117 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 KCNE5Q9UJ90 142 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 DKKL1Q9UK85 242 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 SLC35A3Q9Y2D2 325 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 HRH3Q9Y5N1 445 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 LIPGQ9Y5X9 500 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 DSPPQ9NZW4 1301 aa12.04□□□□□ -0.48
CKAP2-202ENST00000378034 SVILO95425 2214 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 AGAP5A6NIR3 686 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 GTPBP1O00178 669 aaKnown RBP12.03□□□□□ -0.48
CKAP2-202ENST00000378034 ZNF264O43296 627 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 DBIP07108 87 aaKnown RBP12.03□□□□□ -0.48
CKAP2-202ENST00000378034 ARAFP10398 606 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 RPS4Y1P22090 263 aaKnown RBP12.03□□□□□ -0.48
CKAP2-202ENST00000378034 HSF1Q00613 529 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 RBBP4Q09028 425 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 FGFBP1Q14512 234 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 ZSWIM7Q19AV6 140 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 NANOGP8Q6NSW7 305 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 FGD2Q7Z6J4 655 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 SERPINA11Q86U17 422 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 PEX5LQ8IYB4 626 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 POU5F2Q8N7G0 328 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 ZNF614Q8N883 585 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 GATSQ8NAP1 163 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 TOR1AIP2Q8NFQ8 470 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 OR14L1PQ8NHC6 308 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 FAM57AQ8TBR7 257 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 C1GALT1C1Q96EU7 318 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 TMEM19Q96HH6 336 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 TREX2Q9BQ50 279 aaPredicted RBP12.03□□□□□ -0.48
CKAP2-202ENST00000378034 SLC6A15Q9H2J7 730 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 RUBCNLQ9H714 662 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 KAT8Q9H7Z6 458 aaKnown RBP12.03□□□□□ -0.48
CKAP2-202ENST00000378034 NANOGQ9H9S0 305 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 OSGIN2Q9Y236 505 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 AP3M1Q9Y2T2 418 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 ZGRF1Q86YA3 2104 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 A0A1B0GUH1 482 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 B4DXG7 233 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 C5orf58C9J3I9 102 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 LINC01387J3KSC0 135 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 FXYD1O00168 92 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 PRRG2O14669 202 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 HCRTR2O43614 444 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 ZIC3O60481 467 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 ACTL6AO96019 429 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 NUDT7P0C024 238 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 UBL4AP11441 157 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 P2RX1P51575 399 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 KCNC4Q03721 635 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 MAPK14Q16539 360 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 EIF2S3LQ2VIR3 472 aaKnown RBP12.03□□□□□ -0.48
CKAP2-202ENST00000378034 EIPR1Q53HC9 387 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 WIPI1Q5MNZ9 446 aaPredicted RBP12.03□□□□□ -0.48
CKAP2-202ENST00000378034 FAM91A1Q658Y4 838 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 OLIG3Q7RTU3 272 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 IFNEQ86WN2 208 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 EID3Q8N140 333 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 CCDC197Q8NCU1 140 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 BBS10Q8TAM1 723 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 PRR7Q8TB68 274 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 RCN3Q96D15 328 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 LAT2Q9GZY6 243 aa12.03□□□□□ -0.48
CKAP2-202ENST00000378034 CACYBPQ9HB71 228 aaKnown RBP12.03□□□□□ -0.48
CKAP2-202ENST00000378034 C15orf38-AP3S2A0A0A6YYH1 394 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 C17orf51A8MQB3 221 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 FAM47E-STBD1D6RA91 191 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 PYCARD-AS1I3L0S3 204 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 CSTAP01040 98 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 HK1P19367 917 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 SLC6A2P23975 617 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 CHMP24386 653 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 CA7P43166 264 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 MTPNP58546 118 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 KCNJ10P78508 379 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 CDK6Q00534 326 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF117Q03924 483 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 CAPRIN1Q14444 709 aaKnown RBP12.02□□□□□ -0.49
CKAP2-202ENST00000378034 VASNQ6EMK4 673 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 REEP3Q6NUK4 255 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 AAGABQ6PD74 315 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 HACD2Q6Y1H2 254 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 NET1Q7Z628 596 aaPredicted RBP12.02□□□□□ -0.49
CKAP2-202ENST00000378034 ARPINQ7Z6K5 226 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 YRDCQ86U90 279 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms