RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SYT5O00445 386 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 ANKRD28O15084 1053 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 SEC14L5O43304 696 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 KITP10721 976 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 CAPN3P20807 821 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 DLX5P56178 289 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 EEF1A1P68104 462 aaKnown RBP15.19■□□□□ 0.02
HMGN4-201ENST00000377575 FLYWCH1Q4VC44 716 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 SPANXN4Q5MJ08 99 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 EEF1A1P5Q5VTE0 462 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 POMZP3Q6PJE2 187 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 OR5D16Q8NGK9 328 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 OR5M1Q8NGP8 315 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 ACTRT2Q8TDY3 377 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 AIG1Q9NVV5 245 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 ZNF337Q9Y3M9 751 aa15.19■□□□□ 0.02
HMGN4-201ENST00000377575 ANKRD17O75179 2603 aaKnown RBP15.19■□□□□ 0.02
HMGN4-201ENST00000377575 C7orf72A4D263 438 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 SLC22A20A6NK97 555 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 KLF11O14901 512 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 ALDOCP09972 364 aaKnown RBP15.18■□□□□ 0.02
HMGN4-201ENST00000377575 MATN1P21941 496 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 UQCRC2P22695 453 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 EPHA3P29320 983 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 S100A3P33764 101 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 RPS3AP61247 264 aaKnown RBP15.18■□□□□ 0.02
HMGN4-201ENST00000377575 RPS26P62854 115 aaKnown RBP15.18■□□□□ 0.02
HMGN4-201ENST00000377575 OCRLQ01968 901 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 CD226Q15762 336 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 TMEM44Q2T9K0 475 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 FAM174BQ3ZCQ3 159 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 OR2A2Q6IF42 318 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 C6orf120Q7Z4R8 191 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 ANKRD46Q86W74 232 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 WDR75Q8IWA0 830 aaKnown RBP15.18■□□□□ 0.02
HMGN4-201ENST00000377575 B4GALNT2Q8NHY0 566 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 PHOSPHO1Q8TCT1 267 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 SMPDL3BQ92485 455 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 INTS12Q96CB8 462 aaKnown RBP15.18■□□□□ 0.02
HMGN4-201ENST00000377575 SH3YL1Q96HL8 342 aaPredicted RBP15.18■□□□□ 0.02
HMGN4-201ENST00000377575 ZBTB18Q99592 522 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 PIGMQ9H3S5 423 aa15.18■□□□□ 0.02
HMGN4-201ENST00000377575 GOLGA8QA0A0J9YX86 632 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 GOLGA8OA6NCC3 632 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 GOLGA8NF8WBI6 632 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 AGR2O95994 175 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 CRHP06850 196 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 KIR2DL3P43628 341 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 AGFG1P52594 562 aaKnown RBP15.17■□□□□ 0.02
HMGN4-201ENST00000377575 ATP12AP54707 1039 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 SUMO3P55854 103 aaPredicted RBP15.17■□□□□ 0.02
HMGN4-201ENST00000377575 NME5P56597 212 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 LRRC74AQ0VAA2 488 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 PLPPR5Q32ZL2 321 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 NXNQ6DKJ4 435 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 C16orf62Q7Z3J2 963 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 TMEM200AQ86VY9 491 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 KIF18BQ86Y91 864 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 GCNT2Q8N0V5 402 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 GTPBP8Q8N3Z3 284 aaPredicted RBP15.17■□□□□ 0.02
HMGN4-201ENST00000377575 METTL25Q8N6Q8 603 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 CHDHQ8NE62 594 aaPredicted RBP15.17■□□□□ 0.02
HMGN4-201ENST00000377575 PIWIL2Q8TC59 973 aaKnown RBP15.17■□□□□ 0.02
HMGN4-201ENST00000377575 MIPOL1Q8TD10 442 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 PINK1Q9BXM7 581 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 MED17Q9NVC6 651 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 EXD2Q9NVH0 621 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 JKAMPQ9P055 326 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 ZNF175Q9Y473 711 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 KCNE3Q9Y6H6 103 aa15.17■□□□□ 0.02
HMGN4-201ENST00000377575 PDZD2O15018 2839 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 NPIPA5A0A0B4J1W7 369 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 SHISA8B8ZZ34 492 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 NPIPA7E9PJI5 369 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 SCN2BO60939 215 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 TNFRSF21O75509 655 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 CPSF4O95639 269 aaKnown RBP15.16■□□□□ 0.02
HMGN4-201ENST00000377575 TGM6O95932 706 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 NPIPA8P0DM63 369 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 FCGR2AP12318 317 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 IDO1P14902 403 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 ME2P23368 584 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 CHI3L1P36222 383 aaPredicted RBP15.16■□□□□ 0.02
HMGN4-201ENST00000377575 CPA2P48052 419 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 KHKP50053 298 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 SUCLG1P53597 346 aaKnown RBP15.16■□□□□ 0.02
HMGN4-201ENST00000377575 CLDN20P56880 219 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 UFM1P61960 85 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 SORDQ00796 357 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 ZNF117Q03924 483 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 FOXF2Q12947 444 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 KLHL26Q53HC5 615 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 ATAD3BQ5T9A4 648 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 PLXDC2Q6UX71 529 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 CLEC4FQ8N1N0 589 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 TRIML2Q8N7C3 387 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 ZNF614Q8N883 585 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 GLB1L3Q8NCI6 653 aaPredicted RBP15.16■□□□□ 0.02
HMGN4-201ENST00000377575 CCDC115Q96NT0 180 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 SDF2Q99470 211 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms