RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 ENKD1Q9H0I2 346 aa20.08■□□□□ 0.81
RNF39-202ENST00000376751 UBQLN3Q9H347 655 aa20.08■□□□□ 0.81
RNF39-202ENST00000376751 UCK1Q9HA47 277 aa20.08■□□□□ 0.81
RNF39-202ENST00000376751 DOLKQ9UPQ8 538 aa20.08■□□□□ 0.81
RNF39-202ENST00000376751 LIMS3P0CW19 117 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 LIMS4P0CW20 117 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 MYL12AP19105 171 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 GCGRP47871 477 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 TRIM16LQ309B1 348 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 DEFB133Q30KQ1 61 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 LRIT3Q3SXY7 679 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 CHRDL2Q6WN34 429 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 RNF217Q8TC41 542 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 BRIX1Q8TDN6 353 aaKnown RBP20.08■□□□□ 0.8
RNF39-202ENST00000376751 RIT1Q92963 219 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 VSTM2LQ96N03 204 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 TGM7Q96PF1 710 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 ASPNQ9BXN1 380 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 MIR1-1HGQ9H1L0 117 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 FLRT3Q9NZU0 649 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 CFL2Q9Y281 166 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 TMEM184BQ9Y519 407 aaPredicted RBP20.08■□□□□ 0.8
RNF39-202ENST00000376751 CSNK1G3Q9Y6M4 447 aa20.08■□□□□ 0.8
RNF39-202ENST00000376751 CEP192Q8TEP8 1941 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 IGHV5-51A0A0C4DH38 117 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 CTNSO60931 367 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 IFI30P13284 250 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 WNT4P56705 351 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 STX4Q12846 297 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 C17orf82Q86X59 251 aaPredicted RBP20.07■□□□□ 0.8
RNF39-202ENST00000376751 ZNF614Q8N883 585 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 OR2T33Q8NG76 320 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 FANK1Q8TC84 345 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 PMM1Q92871 262 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 OR52D1Q9H346 318 aa20.07■□□□□ 0.8
RNF39-202ENST00000376751 HINT3Q9NQE9 182 aaKnown RBP20.07■□□□□ 0.8
RNF39-202ENST00000376751 SIDT1Q9NXL6 827 aaKnown RBP20.07■□□□□ 0.8
RNF39-202ENST00000376751 TP53BP1Q12888 1972 aaPredicted RBP20.07■□□□□ 0.8
RNF39-202ENST00000376751 TMEM129A0AVI4 362 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 IRGMA1A4Y4 181 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 HYKKA2RU49 373 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 SNTNA6NMZ2 147 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 SOCS6O14544 535 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 LRRTM2O43300 516 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 SDC3O75056 442 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 NSA2O95478 260 aaKnown RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 CPEP16870 476 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 MAOAP21397 527 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 TBXA2RP21731 343 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 DRD5P21918 477 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 RPS19P39019 145 aaKnown RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 MLLT3P42568 568 aaPredicted RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 FNTBP49356 437 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 OR4F15Q8NGB8 312 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 GRHL3Q8TE85 626 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 SPACA7Q96KW9 195 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 BARHL1Q9BZE3 327 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 KRCC1Q9NPI7 259 aaPredicted RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 PRTFDC1Q9NRG1 225 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 MED17Q9NVC6 651 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 YARS2Q9Y2Z4 477 aaKnown RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 SPIN1Q9Y657 262 aaPredicted RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 FUOMA2VDF0 154 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 TAF4O00268 1085 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 RACK1P63244 317 aaKnown RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 PRKCDQ05655 676 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 FAM53BQ14153 422 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 ZNF267Q14586 743 aaPredicted RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 SMAD2Q15796 467 aaKnown RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 ZNF554Q86TJ5 538 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 ZNF595Q8IYB9 648 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 GATAD2BQ8WXI9 593 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 KCNS3Q9BQ31 491 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 DNAJB12Q9NXW2 375 aaKnown RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 CBLCQ9ULV8 474 aa20.06■□□□□ 0.8
RNF39-202ENST00000376751 EXOSC1Q9Y3B2 195 aaKnown RBP20.06■□□□□ 0.8
RNF39-202ENST00000376751 PNMA8CA0A1B0GUJ8 204 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 TGM1P22735 817 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 PSMA1P25786 263 aaKnown RBP20.05■□□□□ 0.8
RNF39-202ENST00000376751 PPM1FP49593 454 aaPredicted RBP20.05■□□□□ 0.8
RNF39-202ENST00000376751 NKAIN2Q5VXU1 208 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 NIPAL1Q6NVV3 410 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 GDPGP1Q6ZNW5 385 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 CPOQ8IVL8 374 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 RNF113BQ8IZP6 322 aaKnown RBP20.05■□□□□ 0.8
RNF39-202ENST00000376751 ZNF485Q8NCK3 441 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 OR6C4Q8NGE1 309 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 OR13C2Q8NGS9 318 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 PTCHD1Q96NR3 888 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 ZNF559Q9BR84 538 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 SPRTNQ9H040 489 aaPredicted RBP20.05■□□□□ 0.8
RNF39-202ENST00000376751 MEPEQ9NQ76 525 aaPredicted RBP20.05■□□□□ 0.8
RNF39-202ENST00000376751 POLE4Q9NR33 117 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 UCKL1Q9NWZ5 548 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 SOHLH2Q9NX45 425 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 PLCL2Q9UPR0 1127 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 MRPS33Q9Y291 106 aaKnown RBP20.05■□□□□ 0.8
RNF39-202ENST00000376751 LAMA1P25391 3075 aa20.05■□□□□ 0.8
RNF39-202ENST00000376751 FAM183AA6NL82 134 aa20.04■□□□□ 0.8
RNF39-202ENST00000376751 ZNF670-ZNF695F2Z2N8 137 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms