RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 CMIPQ8IY22 773 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 MAML2Q8IZL2 1156 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 IQCF1Q8N6M8 205 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 TCEANCQ8N8B7 351 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 PTPMT1Q8WUK0 201 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 EDAQ92838 391 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CRELD1Q96HD1 420 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 DCUN1D5Q9BTE7 237 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ITPAQ9BY32 194 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 SLC24A3Q9HC58 644 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ZNF304Q9HCX3 659 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 FGF21Q9NSA1 209 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 DNAJB12Q9NXW2 375 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 SELENONQ9NZV5 590 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 DHCR7Q9UBM7 475 aaKnown RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 ZNF223Q9UK11 482 aaPredicted RBP16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 CBLCQ9ULV8 474 aa16.65■□□□□ 0.26
HLA-DQB1-201ENST00000374943 TECTAO75443 2155 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 A8MU76 341 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 MAN1A2O60476 641 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 BCAS1O75363 584 aaPredicted RBP16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 NTN1O95631 604 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ATP12AP54707 1039 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 HLA-BQ31612 363 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PLAG1Q6DJT9 500 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ACSM5Q6NUN0 579 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 OR8D4Q8NGM9 314 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CNOT9Q92600 299 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 OSTF1Q92882 214 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PRRG3Q9BZD7 231 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 EGLN3Q9H6Z9 239 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 IL20Q9NYY1 176 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TVP23BQ9NYZ1 205 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RPL36Q9Y3U8 105 aaKnown RBP16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 USP34Q70CQ2 3546 aa16.64■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMX2-CTNND1H3BSU7 103 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PRKYO43930 277 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PIP5K1CO60331 668 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ADORA3P0DMS8 318 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TGFBR2P37173 567 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RHAGQ02094 409 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF620Q6ZNG0 422 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 P2RY8Q86VZ1 359 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 BCORP1Q8N888 145 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZSCAN1Q8NBB4 408 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 WDR36Q8NI36 951 aaKnown RBP16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SENP5Q96HI0 755 aaPredicted RBP16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SLC46A1Q96NT5 459 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 DSN1Q9H410 356 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMEM27Q9HBJ8 222 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 DNAJC27Q9NZQ0 273 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SRPK3Q9UPE1 567 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 HEATR5AQ86XA9 2040 aa16.63■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TCRBV16S1A1N1A0A5B0 115 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SYNDIG1LA6NDD5 238 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SIGLEC6O43699 453 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 DYRK3O43781 588 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 HOXD12P35452 270 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RFX3P48380 749 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SLC37A1P57057 533 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CSTF1Q05048 431 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 AQP6Q13520 282 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ELAVL1Q15717 326 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RNLSQ5VYX0 342 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 GUSBP11Q6P575 273 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 WDR88Q6ZMY6 472 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF367Q7RTV3 350 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 MEX3DQ86XN8 651 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMEM239Q8WW34 195 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PIGKQ92643 395 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TSLPQ969D9 159 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZC3H10Q96K80 434 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 YIPF2Q9BWQ6 316 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TRIM2Q9C040 744 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CFL2Q9Y281 166 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 OR10H1Q9Y4A9 318 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CDH10Q9Y6N8 788 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 A0A0B4J2E0 115 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 A0A1B0GX12 115 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SLC22A1O15245 554 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CHP2O43745 196 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 IGKV3-11P04433 115 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 DBTP11182 482 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ACAA2P42765 397 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 GPR4P46093 362 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ACY1Q03154 408 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF91Q05481 1191 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PRKCDQ05655 676 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 NCF4Q15080 339 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SYT14P1Q58G82 188 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PERM1Q5SV97 790 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ARHGAP40Q5TG30 622 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PRAMEF17Q5VTA0 474 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF574Q6ZN55 896 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF550Q7Z398 422 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMPRSS9Q7Z410 1059 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ARHGAP22Q7Z5H3 698 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 C1orf210Q8IVY1 113 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMEM151BQ8IW70 566 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms