RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 B3GALT2O43825 422 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 AGR2O95994 175 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 ALOX5P09917 674 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 UGT2B7P16662 529 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 TLX1P31314 330 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-202ENST00000374876 PRKAR1BP31321 381 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 AVPR1BP47901 424 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 CDK5Q00535 292 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 ST3GAL3Q11203 375 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 C1DQ13901 141 aaKnown RBP14.43□□□□□ -0.1
CCDC40-202ENST00000374876 SNAPC1Q16533 368 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 SYT14P1Q58G82 188 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 SLC25A30Q5SVS4 291 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 ACSM5Q6NUN0 579 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 ARMC6Q6NXE6 501 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 FAM111BQ6SJ93 734 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 ZNF730Q6ZMV8 503 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 PLEKHG7Q6ZR37 379 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 RRM2BQ7LG56 351 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 CACTIN-AS1Q8N1I8 211 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 OR7G2Q8NG99 324 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 OR52P1PQ8NH57 321 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 FLVCR1-AS1Q8TAF5 88 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 TEX47Q8TBZ9 253 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 GNPDA2Q8TDQ7 276 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 SLC35A4Q96G79 324 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 OR2A5Q96R48 311 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 CACYBPQ9HB71 228 aaKnown RBP14.43□□□□□ -0.1
CCDC40-202ENST00000374876 ANKMY1Q9P2S6 941 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 MKLN1Q9UL63 735 aa14.43□□□□□ -0.1
CCDC40-202ENST00000374876 GPR55Q9Y2T6 319 aaPredicted RBP14.43□□□□□ -0.1
CCDC40-202ENST00000374876 SAGE2PA6NJ88 616 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 MYL12BO14950 172 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 FCMRO60667 390 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 CTSVO60911 334 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 SOX3P41225 446 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 SEPHS1P49903 392 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 RELAQ04206 551 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 CAMK2BQ13554 666 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 DNASE1L3Q13609 305 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 DOC2BQ14184 412 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 RNLSQ5VYX0 342 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 MFSD12Q6NUT3 480 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 MEX3DQ86XN8 651 aaKnown RBP14.42□□□□□ -0.1
CCDC40-202ENST00000374876 CYP4Z2PQ8N1L4 340 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 SLC16A11Q8NCK7 471 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 SLC9A6Q92581 669 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 TM4SF19Q96DZ7 209 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 ZDHHC12Q96GR4 267 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 MAP3K3Q99759 626 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 DPYSL5Q9BPU6 564 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 EGLN3Q9H6Z9 239 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 HHATLQ9HCP6 504 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 EXOSC4Q9NPD3 245 aaKnown RBP14.42□□□□□ -0.1
CCDC40-202ENST00000374876 KCMF1Q9P0J7 381 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 PEX16Q9Y5Y5 336 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 FAM221BA6H8Z2 402 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 AP3D1O14617 1153 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 P2RX6O15547 441 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 UPK1BO75841 260 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 ZNF10P21506 573 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-202ENST00000374876 CCKBRP32239 447 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 RGS8P57771 180 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-202ENST00000374876 SNRPNP63162 240 aaKnown RBP14.42□□□□□ -0.1
CCDC40-202ENST00000374876 ZNF45Q02386 682 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 CLPPQ16740 277 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-202ENST00000374876 C3orf38Q5JPI3 329 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 CDC73Q6P1J9 531 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 SLC27A4Q6P1M0 643 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 FIGLAQ6QHK4 219 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 ABHD13Q7L211 337 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 KIF18BQ86Y91 864 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 OR4N5Q8IXE1 308 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 NANOGP1Q8N7R0 232 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 CAMKVQ8NCB2 501 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 PROKR2Q8NFJ6 384 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 DIO2Q92813 273 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 CDS1Q92903 461 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 ZNF582Q96NG8 517 aaPredicted RBP14.42□□□□□ -0.1
CCDC40-202ENST00000374876 PLA2G12AQ9BZM1 189 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 POLR2J2Q9GZM3 115 aaKnown RBP14.42□□□□□ -0.1
CCDC40-202ENST00000374876 RAB33BQ9H082 229 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 ABCB10Q9NRK6 738 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 ACTR10Q9NZ32 417 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 EPHA6Q9UF33 1036 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 SATB2Q9UPW6 733 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 MSRB2Q9Y3D2 182 aa14.42□□□□□ -0.1
CCDC40-202ENST00000374876 MN1Q10571 1320 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-202ENST00000374876 AKAP13Q12802 2813 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 TRABD2BA6NFA1 517 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 GPX5O75715 221 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 RAB36O95755 333 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 SMIM10L1P0DMW3 83 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 PSMA1P25786 263 aaKnown RBP14.41□□□□□ -0.1
CCDC40-202ENST00000374876 PRKCDQ05655 676 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 TSPAN31Q12999 210 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 FCRL6Q6DN72 434 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 HEPHL1Q6MZM0 1159 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 PLEKHM3Q6ZWE6 761 aa14.41□□□□□ -0.1
CCDC40-202ENST00000374876 PRICKLE2Q7Z3G6 844 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms