RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TUBBP07437 444 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 GSTA1P08263 222 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 SOD3P08294 240 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 ACP2P11117 423 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 PYGBP11216 843 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 SHC1P29353 583 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 ZNF41P51814 821 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-202ENST00000374426 PRKAG1P54619 331 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 RPS4XP62701 263 aaKnown RBP12.29□□□□□ -0.44
CXCL12-202ENST00000374426 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 WHAMMP3Q1A5X7 153 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 CLEC12BQ2HXU8 276 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 ZNF385BQ569K4 471 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 FIGNL1Q6PIW4 674 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 FRMD7Q6ZUT3 714 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 GABRG1Q8N1C3 465 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 CDRT4Q8N9R6 151 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 SLC16A11Q8NCK7 471 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 ACMSDQ8TDX5 336 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 ROBO4Q8WZ75 1007 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 OSTF1Q92882 214 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 SH3YL1Q96HL8 342 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-202ENST00000374426 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
CXCL12-202ENST00000374426 HHATLQ9HCP6 504 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 RRAGDQ9NQL2 400 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-202ENST00000374426 NTMQ9P121 344 aa12.29□□□□□ -0.44
CXCL12-202ENST00000374426 NPIPB8E9PQR5 432 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 NTN1O95631 604 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 LINGO3P0C6S8 592 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 DANCRP0C864 163 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 ME2P23368 584 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 GPC1P35052 558 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 CARD18P57730 90 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 DMTNQ08495 405 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 VEZF1Q14119 521 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 CD226Q15762 336 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 ZNF239Q16600 458 aaKnown RBP12.28□□□□□ -0.44
CXCL12-202ENST00000374426 DUSP5Q16690 384 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 HEPHL1Q6MZM0 1159 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 TFAP2EQ6VUC0 442 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 ZYG11AQ6WRX3 759 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 NUFIP2Q7Z417 695 aaKnown RBP12.28□□□□□ -0.44
CXCL12-202ENST00000374426 ATG4DQ86TL0 474 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-202ENST00000374426 TRABD2AQ86V40 505 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 LILRA2Q8N149 483 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 CEP112Q8N8E3 955 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 NUP43Q8NFH3 380 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 STEAP2Q8NFT2 490 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 OR6Y1Q8NGX8 325 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 CEP70Q8NHQ1 597 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 RNF128Q8TEB7 428 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 MZB1Q8WU39 189 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 ABHD3Q8WU67 409 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 CCDC126Q96EE4 140 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 ZNF764Q96H86 408 aaPredicted RBP12.28□□□□□ -0.44
CXCL12-202ENST00000374426 KLHL15Q96M94 604 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 MS4A4EQ96PG1 132 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 TACO1Q9BSH4 297 aaKnown RBP12.28□□□□□ -0.44
CXCL12-202ENST00000374426 UBQLN4Q9NRR5 601 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 RNF115Q9Y4L5 304 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 PTGDR2Q9Y5Y4 395 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 ALPK2Q86TB3 2170 aa12.28□□□□□ -0.44
CXCL12-202ENST00000374426 PLCE1Q9P212 2302 aa12.27□□□□□ -0.44
CXCL12-202ENST00000374426 CLOCKO15516 846 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 RIPK2O43353 540 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 EFNA2O43921 213 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 SEC22BO75396 215 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 CRCPO75575 148 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 MYL2P10916 166 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 PRPH2P23942 346 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 SFTPDP35247 375 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 FRKP42685 505 aaPredicted RBP12.27□□□□□ -0.45
CXCL12-202ENST00000374426 PRIM2P49643 509 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 TAB1Q15750 504 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 ETFDHQ16134 617 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 EXOSC6Q5RKV6 272 aaKnown RBP12.27□□□□□ -0.45
CXCL12-202ENST00000374426 NCMAPQ5T1S8 102 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 PDSS1Q5T2R2 415 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 CCNJQ5T5M9 372 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 GTF2IRD2BQ6EKJ0 949 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 SZRD1Q7Z422 152 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 GTF2IRD2Q86UP8 949 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 MISPQ8IVT2 679 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 NEUROG1Q92886 237 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 FBXW5Q969U6 566 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 ZBED6CLQ96FA7 236 aaPredicted RBP12.27□□□□□ -0.45
CXCL12-202ENST00000374426 OTUB1Q96FW1 271 aaPredicted RBP12.27□□□□□ -0.45
CXCL12-202ENST00000374426 C16orf58Q96GQ5 468 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 METTL2AQ96IZ6 378 aaKnown RBP12.27□□□□□ -0.45
CXCL12-202ENST00000374426 HDHD5Q9BXW7 423 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 SRXN1Q9BYN0 137 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 REG4Q9BYZ8 158 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 DCDC2Q9UHG0 476 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 MAGED1Q9Y5V3 778 aaPredicted RBP12.27□□□□□ -0.45
CXCL12-202ENST00000374426 CR1P17927 2039 aa12.27□□□□□ -0.45
CXCL12-202ENST00000374426 A0A1W2PQD3 144 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 H3BQF6 201 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 SCDO00767 359 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 AKAP10O43572 662 aa12.26□□□□□ -0.45
CXCL12-202ENST00000374426 TBX19O60806 448 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms