RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 SLC35C2Q9NQQ7 365 aa13.28□□□□□ -0.28
HMGA1-203ENST00000374116 PSORS1C1Q9UIG5 152 aa13.28□□□□□ -0.28
HMGA1-203ENST00000374116 KLK4Q9Y5K2 254 aa13.28□□□□□ -0.28
HMGA1-203ENST00000374116 CCDC88CQ9P219 2028 aa13.28□□□□□ -0.28
HMGA1-203ENST00000374116 UGT2B17O75795 530 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 FADS2O95864 444 aaKnown RBP13.27□□□□□ -0.28
HMGA1-203ENST00000374116 CD36P16671 472 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 HIST1H1TP22492 207 aaPredicted RBP13.27□□□□□ -0.28
HMGA1-203ENST00000374116 NTSP30990 170 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 TSFMP43897 325 aaKnown RBP13.27□□□□□ -0.28
HMGA1-203ENST00000374116 OR3A3P47888 321 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 UGT2B15P54855 530 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 ACY1Q03154 408 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 EIF3IQ13347 325 aaKnown RBP13.27□□□□□ -0.28
HMGA1-203ENST00000374116 TP53BP2Q13625 1128 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 RPS26P11Q5JNZ5 115 aaPredicted RBP13.27□□□□□ -0.28
HMGA1-203ENST00000374116 DCAF12Q5T6F0 453 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 Q6ZPB1 254 aaPredicted RBP13.27□□□□□ -0.28
HMGA1-203ENST00000374116 AHSA2Q719I0 299 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 VN1R4Q7Z5H5 301 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 METTL27Q8N6F8 245 aaPredicted RBP13.27□□□□□ -0.28
HMGA1-203ENST00000374116 OR9Q2Q8NGE9 314 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 AMDHD1Q96NU7 426 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 ITPAQ9BY32 194 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 GLIPR2Q9H4G4 154 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 AKIRIN1Q9H9L7 192 aaPredicted RBP13.27□□□□□ -0.28
HMGA1-203ENST00000374116 P2RX2Q9UBL9 471 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 DHCR7Q9UBM7 475 aaKnown RBP13.27□□□□□ -0.28
HMGA1-203ENST00000374116 PLCL2Q9UPR0 1127 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 MSRB2Q9Y3D2 182 aa13.27□□□□□ -0.28
HMGA1-203ENST00000374116 A0A0G2JN53 185 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 H3BMH7 237 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 ZNF749O43361 778 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 NAGAP17050 411 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 ATP5A1P25705 553 aaKnown RBP13.27□□□□□ -0.29
HMGA1-203ENST00000374116 GPC1P35052 558 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 ANXA11P50995 505 aaKnown RBP13.27□□□□□ -0.29
HMGA1-203ENST00000374116 SLAMF1Q13291 335 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 GANABQ14697 944 aaKnown RBP13.27□□□□□ -0.29
HMGA1-203ENST00000374116 TOR1AIP1Q5JTV8 583 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 CCDC190Q86UF4 302 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 NLGN4XQ8N0W4 816 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 TAGAPQ8N103 731 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 SHISA5Q8N114 240 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 ACOT4Q8N9L9 421 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 KCT2Q8NC54 265 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 SRFBP1Q8NEF9 429 aaKnown RBP13.27□□□□□ -0.29
HMGA1-203ENST00000374116 RAB8BQ92930 207 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 SLC35G5Q96KT7 338 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 ZNF354BQ96LW1 612 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 TAAR9Q96RI9 348 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 RHNO1Q9BSD3 238 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 COPS4Q9BT78 406 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 CDADC1Q9BWV3 514 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 ULBP3Q9BZM4 244 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 ASCL3Q9NQ33 180 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 SERTAD3Q9UJW9 196 aa13.27□□□□□ -0.29
HMGA1-203ENST00000374116 MRPS2Q9Y399 296 aaKnown RBP13.27□□□□□ -0.29
HMGA1-203ENST00000374116 DMXL2Q8TDJ6 3036 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 A0A1W2PR48 441 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 CLCA1A8K7I4 914 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 B4E171 279 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 DSCR3O14972 297 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 ERI3O43414 337 aaKnown RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 SLC28A2O43868 658 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 MTRF1O75570 445 aaKnown RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 SCRG1O75711 98 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 IL7P13232 177 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 CTRB1P17538 263 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 ALOX12P18054 663 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 GABRB1P18505 474 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 GTF2E2P29084 291 aaKnown RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 RBMS1P29558 406 aaKnown RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 PPP2R1BP30154 601 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 TSPAN7P41732 249 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 KCNJ5P48544 419 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 LIM2P55344 173 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 C1orf189Q5VU69 101 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 CTRB2Q6GPI1 263 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 ZNF770Q6IQ21 691 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 BHLHB9Q6PI77 547 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 TMEM64Q6YI46 380 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 SLC44A2Q8IWA5 706 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 AQP11Q8NBQ7 271 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 GPR32P1Q8NGA4 272 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 SFXN5Q8TD22 340 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 RPL3LQ92901 407 aaKnown RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 RERGQ96A58 199 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 BBS4Q96RK4 519 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 NRSN2Q9GZP1 204 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 NUAK2Q9H093 628 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 RPRD1BQ9NQG5 326 aaKnown RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 SEMA3GQ9NS98 782 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 GIMAP4Q9NUV9 329 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 PAQR5Q9NXK6 330 aaPredicted RBP13.26□□□□□ -0.29
HMGA1-203ENST00000374116 ZNF226Q9NYT6 803 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 NUP50Q9UKX7 468 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 CES1P1Q9UKY3 287 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 TMCC3Q9ULS5 477 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms