RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 NR4A2P43354 598 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 HTR6P50406 440 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 SF3A2Q15428 464 aaKnown RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 FAM217AQ8IXS0 508 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 RNF186Q9NXI6 227 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 KIF25Q9UIL4 384 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 PCDHB10Q9UN67 800 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 YARS2Q9Y2Z4 477 aaKnown RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 LOC285095A0A1B0GVY8 99 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 ANTXRLA6NF34 631 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 ARSBP15848 533 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 TRA2BP62995 288 aaKnown RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 CLVS2Q5SYC1 327 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 HACD4Q5VWC8 232 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 PM20D1Q6GTS8 502 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 TMEM25Q86YD3 366 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 ZFAND1Q8TCF1 268 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 PGAP3Q96FM1 320 aaPredicted RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 COQ10AQ96MF6 247 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 SAV1Q9H4B6 383 aaPredicted RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 CREBZFQ9NS37 354 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 KCMF1Q9P0J7 381 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 UBFD1O14562 309 aaKnown RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 SERPINA7P05543 415 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 IDUAP35475 653 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 SSTP61278 116 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 RAB40BQ12829 278 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 OR7A5Q15622 319 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 DUSP7Q16829 419 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 DCST2Q5T1A1 773 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 CNIH2Q6PI25 160 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 CYP4V2Q6ZWL3 525 aaPredicted RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 DPPA4Q7L190 304 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 OR9Q2Q8NGE9 314 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 ZNF296Q8WUU4 475 aaPredicted RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 FRZBQ92765 325 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 CIDECQ96AQ7 238 aaPredicted RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 NICN1Q9BSH3 213 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 SLC25A31Q9H0C2 315 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 BIN3Q9NQY0 253 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 FBXO7Q9Y3I1 522 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 PCDHGA7Q9Y5G6 932 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 FAM171A2A8MVW0 826 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 NUDT21O43809 227 aaKnown RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 FGF4P08620 206 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 GSCP56915 257 aaPredicted RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 PCBD1P61457 104 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 ZXDBP98169 803 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 SLC39A5Q6ZMH5 540 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 OR51L1Q8NGJ5 315 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 SYNPRQ8TBG9 265 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 RTP4Q96DX8 246 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 PRRC1Q96M27 445 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 INPP5EQ9NRR6 644 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 RPH3AQ9Y2J0 694 aaPredicted RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 ATG4BQ9Y4P1 393 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 KIR2DS5A0A0G2JLQ3 304 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 A0A0G2JNG1 304 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 KIR2DS3K7RE56 304 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 ARPC5O15511 151 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 GPR137BO60478 399 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 PTPN6P29350 595 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 KIR2DS5Q14953 304 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 PLAG1Q6DJT9 500 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 ZNF300Q96RE9 604 aaPredicted RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 ANKRD60Q9BZ19 345 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 SERTAD4Q9NUC0 356 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 ZDHHC7Q9NXF8 308 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 PLEK2Q9NYT0 353 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 AK6Q9Y3D8 172 aaKnown RBP10.87□□□□□ -0.67
VCL-202ENST00000372755 SPO11Q9Y5K1 396 aa10.87□□□□□ -0.67
VCL-202ENST00000372755 LOC105369274A0A096LPK9 316 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 PLSCR5A0PG75 271 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ALDOBP05062 364 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 TPT1P13693 172 aaKnown RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 ITGB7P26010 798 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 C6orf132Q5T0Z8 1188 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ZNF761Q86XN6 746 aaPredicted RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 OR4N4Q8N0Y3 316 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 CLEC1AQ8NC01 280 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 TAAR8Q969N4 342 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 MOCOSQ96EN8 888 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 SNX18Q96RF0 628 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 MYEF2Q9P2K5 600 aaKnown RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 B4DXG7 233 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 DVL2O14641 736 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 SPDEFO95238 335 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 BMP4P12644 408 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 TNFRSF1BP20333 461 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 P2RY2P41231 377 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 EFNA3P52797 238 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 PIN1Q13526 163 aaPredicted RBP10.86□□□□□ -0.67
VCL-202ENST00000372755 SERPINA11Q86U17 422 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 NPWQ8N729 165 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 OR7G3Q8NG95 312 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 CD200R1Q8TD46 325 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 RHBDD1Q8TEB9 315 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ITPKCQ96DU7 683 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 C1QTNF2Q9BXJ5 285 aa10.86□□□□□ -0.67
VCL-202ENST00000372755 ENKD1Q9H0I2 346 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms