RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 GJA4P35212 333 aa11.86□□□□□ -0.51
CTPS1-202ENST00000372621 TNFRSF17Q02223 184 aa11.86□□□□□ -0.51
CTPS1-202ENST00000372621 TJAP1Q5JTD0 557 aa11.86□□□□□ -0.51
CTPS1-202ENST00000372621 EXOSC6Q5RKV6 272 aaKnown RBP11.86□□□□□ -0.51
CTPS1-202ENST00000372621 TMEM99Q8N816 258 aa11.86□□□□□ -0.51
CTPS1-202ENST00000372621 OR4M2Q8NGB6 313 aa11.86□□□□□ -0.51
CTPS1-202ENST00000372621 OR5M3Q8NGP4 307 aa11.86□□□□□ -0.51
CTPS1-202ENST00000372621 JPH3Q8WXH2 748 aaPredicted RBP11.86□□□□□ -0.51
CTPS1-202ENST00000372621 KCNN2Q9H2S1 579 aa11.86□□□□□ -0.51
CTPS1-202ENST00000372621 SIDT1Q9NXL6 827 aaKnown RBP11.86□□□□□ -0.51
CTPS1-202ENST00000372621 LINC01553A4QN01 128 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 C5orf67F2Z3F1 127 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 PLOD3O60568 738 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 FUT1P19526 365 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 C5AR1P21730 350 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 WASP42768 502 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 RRAS2P62070 204 aaPredicted RBP11.85□□□□□ -0.51
CTPS1-202ENST00000372621 LNX2Q8N448 690 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 NT5CQ8TCD5 201 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 SCARF2Q96GP6 870 aaPredicted RBP11.85□□□□□ -0.51
CTPS1-202ENST00000372621 DPH1Q9BZG8 443 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 MED20Q9H944 212 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 KRCC1Q9NPI7 259 aaPredicted RBP11.85□□□□□ -0.51
CTPS1-202ENST00000372621 C20orf141Q9NUB4 165 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 PTGFRNQ9P2B2 879 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 EXTL2Q9UBQ6 330 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 GPSM3Q9Y4H4 160 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 ORC5O43913 435 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 ADH1BP00325 375 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 PRG2P13727 222 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 SLC6A1P30531 599 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 IGFALSP35858 605 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 GALEQ14376 348 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 MAPK14Q16539 360 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 PRPF38BQ5VTL8 546 aaKnown RBP11.85□□□□□ -0.51
CTPS1-202ENST00000372621 PLCZ1Q86YW0 608 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 PFN4Q8NHR9 129 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 TRIM63Q969Q1 353 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 CREB3L1Q96BA8 519 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 ZNF350Q9GZX5 532 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 DPP7Q9UHL4 492 aa11.85□□□□□ -0.51
CTPS1-202ENST00000372621 TRAPPC13A5PLN9 417 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 LANCL1O43813 399 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 ZNF780AO75290 641 aaPredicted RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 SMIM10L1P0DMW3 83 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 RFX3P48380 749 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 CSTF1Q05048 431 aaKnown RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 IDNKQ5T6J7 187 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 SYCE2Q6PIF2 218 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 MTSS1LQ765P7 747 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 LRRC28Q86X40 367 aaPredicted RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 RNF113BQ8IZP6 322 aaKnown RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 FANK1Q8TC84 345 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 PTP4A1Q93096 173 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 SMIM10Q96HG1 83 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 WACQ9BTA9 647 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 GTPBP2Q9BX10 602 aaKnown RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 RPRD1BQ9NQG5 326 aaKnown RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 PLPP2O43688 288 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 CD53P19397 219 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 PAICSP22234 425 aaKnown RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 RPS15AP62244 130 aaKnown RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 RPS21P63220 83 aaKnown RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 SHC2P98077 582 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 EIPR1Q53HC9 387 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 FHL5Q5TD97 284 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 VITQ6UXI7 678 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 COL26A1Q96A83 441 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 KCTD12Q96CX2 325 aaKnown RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 TM4SF19Q96DZ7 209 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 HS6ST2Q96MM7 605 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 TRPV4Q9HBA0 871 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 MCUBQ9NWR8 336 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 CLDND1Q9NY35 253 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 OBP2AQ9NY56 170 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 OR6C2Q9NZP2 312 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 PHF11Q9UIL8 331 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 KCNE5Q9UJ90 142 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 SCN2AQ99250 2005 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 BTN3A3O00478 584 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 DNAJB6O75190 326 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 SC5DO75845 299 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 EIF4EP06730 217 aaKnown RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 SHC1P29353 583 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 SOX9P48436 509 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 GPR176Q14439 515 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 CLPPQ16740 277 aaPredicted RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 PLA1AQ53H76 456 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 CCNJQ5T5M9 372 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 LAMTOR1Q6IAA8 161 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 TANGO2Q6ICL3 276 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 NANOGNBQ7Z5D8 188 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 ADGRD2Q7Z7M1 963 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 ASPGQ86U10 573 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 RANBP3LQ86VV4 465 aaPredicted RBP11.84□□□□□ -0.51
CTPS1-202ENST00000372621 AMIGO1Q86WK6 493 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 OR4K14Q8NGD5 310 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 OR5W2Q8NH69 310 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 FLVCR1-AS1Q8TAF5 88 aa11.84□□□□□ -0.51
CTPS1-202ENST00000372621 PIGUQ9H490 435 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms