RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ST13P50502 369 aaKnown RBP23.12■■□□□ 1.29
CTSA-203ENST00000372459 TBCEQ15813 527 aaPredicted RBP23.12■■□□□ 1.29
CTSA-203ENST00000372459 TMEM201Q5SNT2 666 aa23.12■■□□□ 1.29
CTSA-203ENST00000372459 PERM1Q5SV97 790 aa23.12■■□□□ 1.29
CTSA-203ENST00000372459 KIF18BQ86Y91 864 aa23.12■■□□□ 1.29
CTSA-203ENST00000372459 GRAMD2AQ8IUY3 354 aa23.12■■□□□ 1.29
CTSA-203ENST00000372459 NRMQ8IXM6 262 aa23.12■■□□□ 1.29
CTSA-203ENST00000372459 IQCF1Q8N6M8 205 aa23.12■■□□□ 1.29
CTSA-203ENST00000372459 ABTB1Q969K4 478 aaPredicted RBP23.12■■□□□ 1.29
CTSA-203ENST00000372459 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.12■■□□□ 1.29
CTSA-203ENST00000372459 TVP23BQ9NYZ1 205 aa23.12■■□□□ 1.29
CTSA-203ENST00000372459 IGKV3D-11A0A0A0MRZ8 115 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 CLPXO76031 633 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 ZNF12P17014 697 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 PSMD4P55036 377 aaKnown RBP23.11■■□□□ 1.29
CTSA-203ENST00000372459 ST3GAL4Q11206 333 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 ARHGAP40Q5TG30 622 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 UBE2UQ5VVX9 321 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 MEX3DQ86XN8 651 aaKnown RBP23.11■■□□□ 1.29
CTSA-203ENST00000372459 ANKRD13BQ86YJ7 626 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 TMEM151BQ8IW70 566 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 SENP5Q96HI0 755 aaPredicted RBP23.11■■□□□ 1.29
CTSA-203ENST00000372459 PLEKHA8Q96JA3 519 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 ZNF559Q9BR84 538 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 POLDIP3Q9BY77 421 aaKnown RBP23.11■■□□□ 1.29
CTSA-203ENST00000372459 SLC25A19Q9HC21 320 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 RHBDL2Q9NX52 303 aa23.11■■□□□ 1.29
CTSA-203ENST00000372459 BCAS1O75363 584 aaPredicted RBP23.1■■□□□ 1.29
CTSA-203ENST00000372459 STAT5AP42229 794 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 ZNF141Q15928 474 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 NNATQ16517 81 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 ZSWIM7Q19AV6 140 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 ANKDD1AQ495B1 522 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 ZNF574Q6ZN55 896 aaPredicted RBP23.1■■□□□ 1.29
CTSA-203ENST00000372459 TMPRSS9Q7Z410 1059 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 TCEANCQ8N8B7 351 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 EGLN3Q9H6Z9 239 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 SELENONQ9NZV5 590 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 ADAMTS20P59510 1910 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 ENTPD6O75354 484 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 STSP08842 583 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 ANKRD34CP0C6C1 535 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 PCYT1AP49585 367 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 ACY1Q03154 408 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 PLAURQ03405 335 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 SLC27A4Q6P1M0 643 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 SLC16A12Q6ZSM3 486 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 BCORP1Q8N888 145 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 CNOT9Q92600 299 aaKnown RBP23.1■■□□□ 1.29
CTSA-203ENST00000372459 TSLPQ969D9 159 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 PRSS27Q9BQR3 290 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 PLA2G12AQ9BZM1 189 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 DSN1Q9H410 356 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 TMEM27Q9HBJ8 222 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 SRPK3Q9UPE1 567 aa23.1■■□□□ 1.29
CTSA-203ENST00000372459 MAGEB3O15480 346 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 BMXP51813 675 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 ATP12AP54707 1039 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 OCLNQ16625 522 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 C1orf189Q5VU69 101 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 ACSM5Q6NUN0 579 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 ZNF613Q6PF04 617 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 RNF113BQ8IZP6 322 aaKnown RBP23.09■■□□□ 1.29
CTSA-203ENST00000372459 ZC3H10Q96K80 434 aaKnown RBP23.09■■□□□ 1.29
CTSA-203ENST00000372459 CLCA3PQ9Y6N3 262 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 NPIPB9F8W1W9 429 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 KLF4O43474 513 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 PIP5K1CO60331 668 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 CBFA2T3O75081 653 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 RPLP0P05388 317 aaKnown RBP23.09■■□□□ 1.29
CTSA-203ENST00000372459 PIPP12273 146 aaPredicted RBP23.09■■□□□ 1.29
CTSA-203ENST00000372459 SLC37A1P57057 533 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 CCL7P80098 99 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 RHAGQ02094 409 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 FGFBP1Q14512 234 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.09■■□□□ 1.29
CTSA-203ENST00000372459 ZNF554Q86TJ5 538 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 OR4D9Q8NGE8 314 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 NAT6Q93015 286 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 DNAJB12Q9NXW2 375 aaKnown RBP23.09■■□□□ 1.29
CTSA-203ENST00000372459 CFL2Q9Y281 166 aa23.09■■□□□ 1.29
CTSA-203ENST00000372459 A0A1W2PQM1 296 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 A8MUA0 341 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 LCKP06239 509 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 HOXD12P35452 270 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 SLC15A1P46059 708 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 GPR4P46093 362 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 ELAVL1Q15717 326 aaKnown RBP23.08■■□□□ 1.29
CTSA-203ENST00000372459 VWA2Q5GFL6 755 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 CMIPQ8IY22 773 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 FAM26EQ8N5C1 309 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 EID2Q8N6I1 236 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 C9orf43Q8TAL5 461 aaPredicted RBP23.08■■□□□ 1.29
CTSA-203ENST00000372459 TMEM239Q8WW34 195 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 OSTF1Q92882 214 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 SLC35B4Q969S0 331 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 YIPF6Q96EC8 236 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 SLC46A1Q96NT5 459 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 PRRG3Q9BZD7 231 aa23.08■■□□□ 1.29
CTSA-203ENST00000372459 SLC7A5P2Q9GIP4 190 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms