RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 NPFFR2Q9Y5X5 522 aa17.13■□□□□ 0.33
MMP9-201ENST00000372330 A0A1W2PRQ8 180 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 DISC1C4P0D8 188 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 PRAMEF4O60810 478 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 CDC123O75794 336 aaPredicted RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 IGHA1P01876 353 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 CCR9P51686 369 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 RAE1P78406 368 aaKnown RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 HTRA3P83110 453 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 SMAD3P84022 425 aaKnown RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 IRF8Q02556 426 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 KRT33BQ14525 404 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 TRAM1Q15629 374 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 ZXDCQ2QGD7 858 aaPredicted RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 SYTL3Q4VX76 610 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 PRAMEF9Q5VWM5 478 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 SMARCD3Q6STE5 483 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 RNF175Q8N4F7 328 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 HORMAD2Q8N7B1 307 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 OR10K1Q8NGX5 313 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 SCLYQ96I15 445 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 TSNAXQ99598 290 aaKnown RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 JAM3Q9BX67 310 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 REEP4Q9H6H4 257 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 ASB8Q9H765 288 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 CA10Q9NS85 328 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 TAS2R5Q9NYW4 299 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 MYEF2Q9P2K5 600 aaKnown RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 EXOGQ9Y2C4 368 aaKnown RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 SLC9B1P1A6NJY1 282 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 NEDD8-MDP1E9PL57 170 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 C6orf47O95873 294 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 IL5P05113 134 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 SERPIND1P05546 499 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 EPHX1P07099 455 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 C8GP07360 202 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 SAGP10523 405 aaPredicted RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 MAPK9P45984 424 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 AP3S2P59780 193 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 AP1S1P61966 158 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 ATP13A5Q4VNC0 1218 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 HES5Q5TA89 166 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 FCRLBQ6BAA4 426 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 DHRS7BQ6IAN0 325 aaPredicted RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 ZNF322Q6U7Q0 402 aaPredicted RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 FAM151BQ6UXP7 276 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 UBE2R2Q712K3 238 aaPredicted RBP17.12■□□□□ 0.33
MMP9-201ENST00000372330 IGSF21Q96ID5 467 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 ZNF649Q9BS31 505 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 TM6SF2Q9BZW4 377 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 OR51M1Q9H341 326 aa17.12■□□□□ 0.33
MMP9-201ENST00000372330 MKI67P46013 3256 aaKnown RBP17.11■□□□□ 0.33
MMP9-201ENST00000372330 HYAL3O43820 417 aaPredicted RBP17.11■□□□□ 0.33
MMP9-201ENST00000372330 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
MMP9-201ENST00000372330 GPR37L1O60883 481 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 SEMA7AO75326 666 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 LATS1O95835 1130 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 ZNF806P0C7X5 589 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 MMP11P24347 488 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 RPL3P39023 403 aaKnown RBP17.11■□□□□ 0.33
MMP9-201ENST00000372330 STAT5AP42229 794 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 PSMD4P55036 377 aaKnown RBP17.11■□□□□ 0.33
MMP9-201ENST00000372330 CDH11P55287 796 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 DLX5P56178 289 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 TPGS2Q68CL5 300 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 ADNP2Q6IQ32 1131 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 CDC73Q6P1J9 531 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 C1orf94Q6P1W5 598 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 LRRN1Q6UXK5 716 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 KLBQ86Z14 1044 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 SLC44A3Q8N4M1 653 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 DCAF4L2Q8NA75 395 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 OR4K1Q8NGD4 311 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 OR51Q1Q8NH59 317 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 ALG14Q96F25 216 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 MTERF1Q99551 399 aaKnown RBP17.11■□□□□ 0.33
MMP9-201ENST00000372330 ZNF334Q9HCZ1 680 aaPredicted RBP17.11■□□□□ 0.33
MMP9-201ENST00000372330 ABRACLQ9P1F3 81 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 ZNF69Q9UC07 566 aa17.11■□□□□ 0.33
MMP9-201ENST00000372330 GNG14A0A1W2PPG7 69 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 C5orf58C9J3I9 102 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 SHC1P29353 583 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 GDNFP39905 211 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 AVPI1Q5T686 147 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 ZNF626Q68DY1 528 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 SFRP4Q6FHJ7 346 aaPredicted RBP17.1■□□□□ 0.33
MMP9-201ENST00000372330 WFDC5Q8TCV5 224 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 SETD7Q8WTS6 366 aaKnown RBP17.1■□□□□ 0.33
MMP9-201ENST00000372330 SORCS1Q8WY21 1168 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 C19orf43Q9BQ61 176 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 OR10A4Q9H209 315 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 PIGMQ9H3S5 423 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 ZFYVE1Q9HBF4 777 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 FLVCR2Q9UPI3 526 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 K7ERQ8 282 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 WRBO00258 174 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 GAPDHSO14556 408 aaPredicted RBP17.1■□□□□ 0.33
MMP9-201ENST00000372330 ACRV1P26436 265 aa17.1■□□□□ 0.33
MMP9-201ENST00000372330 DCDP81605 110 aaKnown RBP17.1■□□□□ 0.33
MMP9-201ENST00000372330 DDX39BQ13838 428 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms