RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 COL26A1Q96A83 441 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 WFDC6Q9BQY6 131 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 ZNF350Q9GZX5 532 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 SAP130Q9H0E3 1048 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 OCEL1Q9H607 264 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 FBXO8Q9NRD0 319 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 MKLN1Q9UL63 735 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 ZNF462Q96JM2 2506 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 LILRA5A6NI73 299 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 M0R082 166 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 CYR61O00622 381 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 NTN3O00634 580 aaPredicted RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 ZBTB11O95625 1053 aaPredicted RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 DBIP07108 87 aaKnown RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 ACP2P11117 423 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 RPS4Y1P22090 263 aaKnown RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 CSTF2P33240 577 aaKnown RBP eCLIP13.07□□□□□ -0.32
LDB3-204ENST00000372066 PTGER1P34995 402 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 FASLGP48023 281 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 PCYT1AP49585 367 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 PDX1P52945 283 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 CCL7P80098 99 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 CLN3Q13286 438 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 TYW3Q6IPR3 259 aaKnown RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 USP43Q70EL4 1123 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 RRM2BQ7LG56 351 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 MRGPREQ86SM8 312 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 RANBP3LQ86VV4 465 aaPredicted RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 GKN2Q86XP6 184 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 VRK2Q86Y07 508 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 ZNF619Q8N2I2 560 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 C19orf47Q8N9M1 422 aaKnown RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 DRAXINQ8NBI3 349 aaPredicted RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 TEX47Q8TBZ9 253 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 CCDC74AQ96AQ1 378 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 PPP1R14BQ96C90 147 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 ZHX1-C8orf76Q96EF9 292 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 PLEKHA8Q96JA3 519 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 GFM1Q96RP9 751 aaKnown RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 TEX12Q9BXU0 123 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.07□□□□□ -0.32
LDB3-204ENST00000372066 ARMC7Q9H6L4 198 aa13.07□□□□□ -0.32
LDB3-204ENST00000372066 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.07□□□□□ -0.32
LDB3-204ENST00000372066 A0A087WUU8 490 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 AGAP5A6NIR3 686 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 B8ZZF3 427 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 PLD2O14939 933 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 SRPX2O60687 465 aaPredicted RBP13.06□□□□□ -0.32
LDB3-204ENST00000372066 ENTPD6O75354 484 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 STX11O75558 287 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 SOX14O95416 240 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 NADKO95544 446 aaPredicted RBP13.06□□□□□ -0.32
LDB3-204ENST00000372066 EIF2S1P05198 315 aaKnown RBP13.06□□□□□ -0.32
LDB3-204ENST00000372066 PVRP15151 417 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 NR4A1P22736 598 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 LIPAP38571 399 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 GIPRP48546 466 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 VBP1P61758 197 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 DUSP5Q16690 384 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.06□□□□□ -0.32
LDB3-204ENST00000372066 ZNF730Q6ZMV8 503 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 RAB11FIP2Q7L804 512 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 NLGN4XQ8N0W4 816 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 SDR16C5Q8N3Y7 309 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 CLDN22Q8N7P3 220 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 NDNFQ8TB73 568 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 SLC9A6Q92581 669 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 HOXB13Q92826 284 aaPredicted RBP13.06□□□□□ -0.32
LDB3-204ENST00000372066 LIN37Q96GY3 246 aaPredicted RBP13.06□□□□□ -0.32
LDB3-204ENST00000372066 TMEM80Q96HE8 168 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 SH3YL1Q96HL8 342 aaPredicted RBP13.06□□□□□ -0.32
LDB3-204ENST00000372066 DACH2Q96NX9 599 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 CCNL2Q96S94 520 aaPredicted RBP13.06□□□□□ -0.32
LDB3-204ENST00000372066 SDF2Q99470 211 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 MCHR1Q99705 422 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 STRADBQ9C0K7 418 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 AMBNQ9NP70 447 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 TBCCD1Q9NVR7 557 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 SELENONQ9NZV5 590 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 OSGIN1Q9UJX0 560 aa13.06□□□□□ -0.32
LDB3-204ENST00000372066 HYKKA2RU49 373 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 FGF17O60258 216 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 FMO6PO60774 539 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 PTHP01270 115 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 SLC35E2P0CK97 266 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 NT5EP21589 574 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 CDH3P22223 829 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 FPR3P25089 353 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 STAT5AP42229 794 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 VSX2P58304 361 aaPredicted RBP13.05□□□□□ -0.32
LDB3-204ENST00000372066 ZNF91Q05481 1191 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 GINS1Q14691 196 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 PRICKLE4Q2TBC4 344 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 ARMCX4Q5H9R4 360 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 DCST2Q5T1A1 773 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 SLC27A4Q6P1M0 643 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 C16orf87Q6PH81 154 aa13.05□□□□□ -0.32
LDB3-204ENST00000372066 OLIG3Q7RTU3 272 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms