RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 F3P13726 295 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 POLR2CP19387 275 aaPredicted RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 RPS25P62851 125 aaKnown RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 COL28A1Q2UY09 1125 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 CCDC157Q569K6 752 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 OGFOD3Q6PK18 319 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 LYPD8Q6UX82 237 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 PAMR1Q6UXH9 720 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 C9orf62Q8N4C0 152 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 GPR32P1Q8NGA4 272 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 TM9SF4Q92544 642 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 CIDECQ96AQ7 238 aaPredicted RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 UPRTQ96BW1 309 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 KCTD12Q96CX2 325 aaKnown RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 MED8Q96G25 268 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 CITED4Q96RK1 184 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ATF6BQ99941 703 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 JAM3Q9BX67 310 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 BEX2Q9BXY8 128 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 NEUROD4Q9HD90 331 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 SEMA3GQ9NS98 782 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 IMP3Q9NV31 184 aaKnown RBP10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 TVP23BQ9NYZ1 205 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 AHSPQ9NZD4 102 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 RHCGQ9UBD6 479 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ACSL6Q9UKU0 697 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 ACSL5Q9ULC5 683 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 CBLCQ9ULV8 474 aa10.69□□□□□ -0.7
TSPAN1-201ENST00000372003 CACNA1EQ15878 2313 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 C7orf66A4D0T2 115 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 A6NCN8 305 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 KDM4EB2RXH2 506 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 CASKO14936 926 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 TLX2O43763 284 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 NME6O75414 186 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 SNAPC5O75971 98 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 DHFRP00374 187 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 SOAT1P35610 550 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 TGM4P49221 684 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 BDH1Q02338 343 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 IL18Q14116 193 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 GINS1Q14691 196 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 NR0B2Q15466 257 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF658BQ4V348 819 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 FLYWCH1Q4VC44 716 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 C14orf28Q4W4Y0 310 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 PAQR6Q6TCH4 344 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 TMEM107Q6UX40 140 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 UTS2BQ765I0 119 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 PIP4P1Q86T03 277 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 AMIGO1Q86WK6 493 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 ARL14Q8N4G2 192 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC37A3Q8NCC5 494 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF485Q8NCK3 441 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC37A2Q8TED4 501 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC38A5Q8WUX1 472 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 OTULINQ96BN8 352 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 LRR1Q96L50 414 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 C12orf66Q96MD2 445 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 INSM2Q96T92 566 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 SPATA5L1Q9BVQ7 753 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 PRR14Q9BWN1 585 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 SGPP1Q9BX95 441 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 MCUBQ9NWR8 336 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF624Q9P2J8 865 aaPredicted RBP10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 NLKQ9UBE8 527 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 HSPB11Q9Y547 144 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 RALGAPA1Q6GYQ0 2036 aa10.68□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC22A5O76082 557 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 KLHL18O94889 574 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 SOX14O95416 240 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC6A1P30531 599 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 IFNGR2P38484 337 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 FEN1P39748 380 aaKnown RBP10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 BDKRB1P46663 353 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 PER3P56645 1201 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 TAS2R50P59544 299 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 FABP5Q01469 135 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 TAGLNQ01995 201 aaKnown RBP10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 RPA4Q13156 261 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 KRT33BQ14525 404 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 PCM1Q15154 2024 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 TRIP6Q15654 476 aaKnown RBP10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 RPE65Q16518 533 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 CYP27C1Q4G0S4 372 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 GUSBP11Q6P575 273 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 WASH2PQ6VEQ5 465 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 TMPRSS11BQ86T26 416 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 SLC51BQ86UW2 128 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 BPHLQ86WA6 291 aaPredicted RBP10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 ZNF761Q86XN6 746 aaPredicted RBP10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 LRRC17Q8N6Y2 441 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 ARIH2OSQ8N7S6 290 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 POGLUT1Q8NBL1 392 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 ANKK1Q8NFD2 765 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 OR52N1Q8NH53 320 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 TMEM131Q92545 1883 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 UCN3Q969E3 161 aa10.67□□□□□ -0.7
TSPAN1-201ENST00000372003 RFKQ969G6 155 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms