RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 C11orf24Q96F05 449 aaPredicted RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PEX11GQ96HA9 241 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 C7orf34Q96L11 122 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF300Q96RE9 604 aaPredicted RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 CSF3RQ99062 836 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 COPS4Q9BT78 406 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 SLC6A16Q9GZN6 736 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 RNF32Q9H0A6 362 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 NT5DC2Q9H857 520 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PRM3Q9NNZ6 103 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ASF1BQ9NVP2 202 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 CLN6Q9NWW5 311 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ABI3Q9P2A4 366 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 PTGFRNQ9P2B2 879 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ERVK-18Q9QC07 812 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 CRNNQ9UBG3 495 aaPredicted RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 ANGPT4Q9Y264 503 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 MAGED1Q9Y5V3 778 aaPredicted RBP9.63□□□□□ -0.87
COL5A1-202ENST00000371820 U3KQV3 271 aa9.63□□□□□ -0.87
COL5A1-202ENST00000371820 TRAV17A0A0B4J275 112 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 GNG14A0A1W2PPG7 69 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 IRGMA1A4Y4 181 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 WIPF3A6NGB9 483 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF860A6NHJ4 632 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 EFCAB9A8MZ26 197 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 LOC110117498-PIK3R3F6TDL0 507 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 CDK2AP1O14519 115 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 CHST10O43529 356 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 CLEC3AO75596 197 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 APOA1P02647 267 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 CDK1P06493 297 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 HTR1AP08908 422 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 RNH1P13489 461 aaKnown RBP9.62□□□□□ -0.87
COL5A1-202ENST00000371820 CD36P16671 472 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 RHCEP18577 417 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 TACR1P25103 407 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 OPRL1P41146 370 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 TAS2R50P59544 299 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 KCNJ10P78508 379 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 CBX3Q13185 183 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 SPCS2Q15005 226 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 NSDHLQ15738 373 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 BTBD16Q32M84 506 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF404Q494X3 552 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 GTDC1Q4AE62 458 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 MEDAGQ5VYS4 303 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 LAIR2Q6ISS4 152 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 PAPD4Q6PIY7 484 aaKnown RBP9.62□□□□□ -0.87
COL5A1-202ENST00000371820 FAM180AQ6UWF9 173 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 DNAJC14Q6Y2X3 702 aaPredicted RBP9.62□□□□□ -0.87
COL5A1-202ENST00000371820 SLCO4C1Q6ZQN7 724 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 QSOX2Q6ZRP7 698 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 PAGE2Q7Z2X7 111 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 ANKRD37Q7Z713 158 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 KRT73Q86Y46 540 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 PTOV1Q86YD1 416 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 STX19Q8N4C7 294 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 CISD2Q8N5K1 135 aaKnown RBP9.62□□□□□ -0.87
COL5A1-202ENST00000371820 ANKRD53Q8N9V6 530 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 SRFBP1Q8NEF9 429 aaKnown RBP9.62□□□□□ -0.87
COL5A1-202ENST00000371820 OR7G3Q8NG95 312 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 OR4A15Q8NGL6 344 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 MCFD2Q8NI22 146 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 PIK3R3Q92569 461 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 TPD52L3Q96J77 140 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 IMMP1LQ96LU5 166 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF354BQ96LW1 612 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 SPNS1Q9H2V7 528 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 ZBTB20Q9HC78 741 aaPredicted RBP9.62□□□□□ -0.87
COL5A1-202ENST00000371820 MYNNQ9NPC7 610 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 IMPAD1Q9NX62 359 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 CCDC59Q9P031 241 aaKnown RBP9.62□□□□□ -0.87
COL5A1-202ENST00000371820 SH3BP4Q9P0V3 963 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 PSORS1C1Q9UIG5 152 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 ERRFI1Q9UJM3 462 aaPredicted RBP9.62□□□□□ -0.87
COL5A1-202ENST00000371820 OSGIN1Q9UJX0 560 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 TMCC3Q9ULS5 477 aa9.62□□□□□ -0.87
COL5A1-202ENST00000371820 C1orf226A1L170 272 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SNTNA6NMZ2 147 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 AIREO43918 545 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 PCDH7O60245 1069 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 LRATO95237 230 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SMIM10L1P0DMW3 83 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 CD247P20963 164 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 UQCRC2P22695 453 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 CDKN2CP42773 168 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 RAB8AP61006 207 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 RHAGQ02094 409 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 PRKCDQ05655 676 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 GNA13Q14344 377 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 RNLSQ5VYX0 342 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 LANCL3Q6ZV70 420 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF367Q7RTV3 350 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 MAMDC2Q7Z304 686 aaPredicted RBP9.61□□□□□ -0.87
COL5A1-202ENST00000371820 GALNT5Q7Z7M9 940 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 ANKRD46Q86W74 232 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SLC5A8Q8N695 610 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 C1orf52Q8N6N3 182 aaKnown RBP9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SIRT6Q8N6T7 355 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 C7orf57Q8NEG2 295 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms