RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 PIP5K1BO14986 540 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 ADAMDEC1O15204 470 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 SMPD2O60906 423 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 SS18L1O75177 396 aaPredicted RBP11.77□□□□□ -0.53
RPF1-201ENST00000370654 NGFRP08138 427 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 NID1P14543 1247 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 PSMD4P55036 377 aaKnown RBP11.77□□□□□ -0.53
RPF1-201ENST00000370654 RPS3AP61247 264 aaKnown RBP11.77□□□□□ -0.53
RPF1-201ENST00000370654 TSC22D1Q15714 1073 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 NDUFAF6Q330K2 333 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 P3H2Q8IVL5 708 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 AGR3Q8TD06 166 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 IGFBPL1Q8WX77 278 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 ROBO4Q8WZ75 1007 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 CDS1Q92903 461 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 ZBED6CLQ96FA7 236 aaPredicted RBP11.77□□□□□ -0.53
RPF1-201ENST00000370654 PERPQ96FX8 193 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 ZNF764Q96H86 408 aaPredicted RBP11.77□□□□□ -0.53
RPF1-201ENST00000370654 METTL2AQ96IZ6 378 aaKnown RBP11.77□□□□□ -0.53
RPF1-201ENST00000370654 C3orf30Q96M34 536 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 MS4A4EQ96PG1 132 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 PIP5K1AQ99755 562 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 C3orf14Q9HBI5 128 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 GIN1Q9NXP7 522 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 SLC17A7Q9P2U7 560 aa11.77□□□□□ -0.53
RPF1-201ENST00000370654 DSCAMO60469 2012 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.76□□□□□ -0.53
RPF1-201ENST00000370654 TTC36A6NLP5 189 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 SMAD7O15105 426 aaKnown RBP11.76□□□□□ -0.53
RPF1-201ENST00000370654 TRIM13O60858 407 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 LINGO3P0C6S8 592 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 LAMP1P11279 417 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 ZNF17P17021 662 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 NAA20P61599 178 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 OCRLQ01968 901 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 TOMM34Q15785 309 aaPredicted RBP11.76□□□□□ -0.53
RPF1-201ENST00000370654 ARL13AQ5H913 290 aaPredicted RBP11.76□□□□□ -0.53
RPF1-201ENST00000370654 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.76□□□□□ -0.53
RPF1-201ENST00000370654 CPTPQ5TA50 214 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 CBLN3Q6UW01 205 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 RNF165Q6ZSG1 346 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 ZCCHC23Q6ZST2 131 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 YTHDF3Q7Z739 585 aaKnown RBP11.76□□□□□ -0.53
RPF1-201ENST00000370654 OR2V1Q8NHB1 315 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 CEP70Q8NHQ1 597 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 TWIST2Q8WVJ9 160 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 COX4I2Q96KJ9 171 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 CCL19Q99731 98 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 SRXN1Q9BYN0 137 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 PRRG4Q9BZD6 226 aa11.76□□□□□ -0.53
RPF1-201ENST00000370654 ACSS1Q9NUB1 689 aaPredicted RBP11.76□□□□□ -0.53
RPF1-201ENST00000370654 PEX11AO75192 247 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 HMGN2P05204 90 aaKnown RBP11.75□□□□□ -0.53
RPF1-201ENST00000370654 FGF4P08620 206 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 ALOX5P09917 674 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 CREB1P16220 341 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 SFTPDP35247 375 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 RAC1P63000 192 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 ZNF117Q03924 483 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 ZNF844Q08AG5 666 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 FOXF1Q12946 379 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 LASP1Q14847 261 aaKnown RBP11.75□□□□□ -0.53
RPF1-201ENST00000370654 VPS26BQ4G0F5 336 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 OLIG3Q7RTU3 272 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 NUFIP2Q7Z417 695 aaKnown RBP11.75□□□□□ -0.53
RPF1-201ENST00000370654 ATG4DQ86TL0 474 aaPredicted RBP11.75□□□□□ -0.53
RPF1-201ENST00000370654 WDR75Q8IWA0 830 aaKnown RBP11.75□□□□□ -0.53
RPF1-201ENST00000370654 DDIASQ8IXT1 998 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 LRRC75A-AS1Q8N1F1 130 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 KRTCAP2Q8N6L1 136 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 COX18Q8N8Q8 333 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 BANPQ8N9N5 519 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 OR6Y1Q8NGX8 325 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 OR6K3Q8NGY3 331 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 ZFP28Q8NHY6 868 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 JADE3Q92613 823 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 OSTF1Q92882 214 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 PIGTQ969N2 578 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 GMPPAQ96IJ6 420 aaPredicted RBP11.75□□□□□ -0.53
RPF1-201ENST00000370654 C1orf50Q9BV19 199 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 C12orf49Q9H741 205 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 CXorf36Q9H7Y0 433 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 UBQLN4Q9NRR5 601 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 ATP6V1HQ9UI12 483 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 TRAF6Q9Y4K3 522 aa11.75□□□□□ -0.53
RPF1-201ENST00000370654 NUP214P35658 2090 aaPredicted RBP11.74□□□□□ -0.53
RPF1-201ENST00000370654 A0A087WZY1 265 aa11.74□□□□□ -0.53
RPF1-201ENST00000370654 TLDC2A0PJX2 215 aa11.74□□□□□ -0.53
RPF1-201ENST00000370654 C7orf72A4D263 438 aa11.74□□□□□ -0.53
RPF1-201ENST00000370654 KIF2AO00139 706 aaPredicted RBP11.74□□□□□ -0.53
RPF1-201ENST00000370654 SCAMP2O15127 329 aaKnown RBP11.74□□□□□ -0.53
RPF1-201ENST00000370654 SPAG7O75391 227 aa11.74□□□□□ -0.53
RPF1-201ENST00000370654 PLGP00747 810 aaPredicted RBP11.74□□□□□ -0.53
RPF1-201ENST00000370654 HEXAP06865 529 aa11.74□□□□□ -0.53
RPF1-201ENST00000370654 FCGR2AP12318 317 aa11.74□□□□□ -0.53
RPF1-201ENST00000370654 AGTR1P30556 359 aa11.74□□□□□ -0.53
RPF1-201ENST00000370654 POU6F2P78424 691 aaPredicted RBP11.74□□□□□ -0.53
RPF1-201ENST00000370654 FGFBP1Q14512 234 aa11.74□□□□□ -0.53
RPF1-201ENST00000370654 PTGR1Q14914 329 aa11.74□□□□□ -0.53
RPF1-201ENST00000370654 XKR7Q5GH72 579 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms