RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 KLHL13Q9P2N7 655 aa13.64□□□□□ -0.23
SSR4-204ENST00000370087 A0A087WZY1 265 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 C7orf72A4D263 438 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 ELOA3DA6NLF2 546 aaPredicted RBP13.63□□□□□ -0.23
SSR4-204ENST00000370087 A8MT66 165 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 SMIM24O75264 130 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 LYZL6O75951 148 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 OXSR1O95747 527 aaPredicted RBP13.63□□□□□ -0.23
SSR4-204ENST00000370087 COL6A2P12110 1019 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 GABRA3P34903 492 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 SFTPDP35247 375 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 SLC18A2Q05940 514 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 NRF1Q16656 503 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 ELOA3BQ3SY89 546 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 CLEC2AQ6UVW9 174 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 BHLHA15Q7RTS1 189 aaPredicted RBP13.63□□□□□ -0.23
SSR4-204ENST00000370087 ELOA3Q8NG57 546 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 OR4C3Q8NH37 302 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 CDC26Q8NHZ8 85 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 SH3YL1Q96HL8 342 aaPredicted RBP13.63□□□□□ -0.23
SSR4-204ENST00000370087 KLHL15Q96M94 604 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 SHARPINQ9H0F6 387 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 NGBQ9NPG2 151 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 DDX18Q9NVP1 670 aaKnown RBP13.63□□□□□ -0.23
SSR4-204ENST00000370087 NMRK1Q9NWW6 199 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 PRSS50Q9UI38 385 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 TMCO1Q9UM00 188 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 SNX8Q9Y5X2 465 aa13.63□□□□□ -0.23
SSR4-204ENST00000370087 PLCE1Q9P212 2302 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 SLC35F4A4IF30 521 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 ABCD4O14678 606 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 EFNA2O43921 213 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 RBP1P09455 135 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 HSD3B1P14060 373 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 DDCP20711 480 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 HSD3B2P26439 372 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 HSD17B3P37058 310 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 CAV1Q03135 178 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 BTKQ06187 659 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 FOXF1Q12946 379 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 HEPACAMQ14CZ8 416 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 STK11Q15831 433 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 TMEM201Q5SNT2 666 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 CPTPQ5TA50 214 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 B3GLCTQ6Y288 498 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 LILRA2Q8N149 483 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 TMEM151AQ8N4L1 468 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 ZBTB8AQ96BR9 441 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 ELP4Q96EB1 424 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 AMDHD1Q96NU7 426 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 C1QTNF3Q9BXJ4 246 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 EQTNQ9NQ60 294 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 STOML1Q9UBI4 398 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 LPAR3Q9UBY5 353 aa13.62□□□□□ -0.23
SSR4-204ENST00000370087 ING1Q9UK53 422 aaPredicted RBP13.62□□□□□ -0.23
SSR4-204ENST00000370087 IGHV3-15A0A0B4J1V0 119 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 ALG1L2C9J202 215 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 E7EQL1 145 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 NDUFB5O43674 189 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 LY6HO94772 140 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 SRD5A1P18405 259 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 THBS2P35442 1172 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 MAP3K8P41279 467 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 PRIM2P49643 509 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 CARD18P57730 90 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 CLCQ05315 142 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 ACSM2AQ08AH3 577 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 C2orf80Q0P641 193 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 ITGADQ13349 1161 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 PPA1Q15181 289 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 CD226Q15762 336 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 GLE1Q53GS7 698 aaKnown RBP13.61□□□□□ -0.23
SSR4-204ENST00000370087 SPIN4Q56A73 249 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 ACSM2BQ68CK6 577 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 CYB5R2Q6BCY4 276 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 TDRPQ86YL5 185 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 FBXO30Q8TB52 745 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 C10orf105Q8TEF2 133 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 ADAD1Q96M93 576 aaKnown RBP13.61□□□□□ -0.23
SSR4-204ENST00000370087 KCNA7Q96RP8 456 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 CXorf36Q9H7Y0 433 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 COQ10BQ9H8M1 238 aa13.61□□□□□ -0.23
SSR4-204ENST00000370087 ESPNB1AK53 854 aa13.6□□□□□ -0.23
SSR4-204ENST00000370087 UBFD1O14562 309 aaKnown RBP13.6□□□□□ -0.23
SSR4-204ENST00000370087 OIP5O43482 229 aa13.6□□□□□ -0.23
SSR4-204ENST00000370087 ZNF500O60304 480 aaPredicted RBP13.6□□□□□ -0.23
SSR4-204ENST00000370087 LMX1BO60663 402 aa13.6□□□□□ -0.23
SSR4-204ENST00000370087 ANXA4P09525 319 aaPredicted RBP13.6□□□□□ -0.23
SSR4-204ENST00000370087 LINGO3P0C6S8 592 aa13.6□□□□□ -0.23
SSR4-204ENST00000370087 RNF144AP50876 292 aaPredicted RBP13.6□□□□□ -0.23
SSR4-204ENST00000370087 ZNF41P51814 821 aaPredicted RBP13.6□□□□□ -0.23
SSR4-204ENST00000370087 PSMD4P55036 377 aaKnown RBP13.6□□□□□ -0.23
SSR4-204ENST00000370087 MANFP55145 182 aaKnown RBP13.6□□□□□ -0.23
SSR4-204ENST00000370087 SLC29A2Q14542 456 aa13.6□□□□□ -0.23
SSR4-204ENST00000370087 RNPS1Q15287 305 aaKnown RBP13.6□□□□□ -0.23
SSR4-204ENST00000370087 ZNHIT3Q15649 155 aaPredicted RBP13.6□□□□□ -0.23
SSR4-204ENST00000370087 UNC50Q53HI1 259 aa13.6□□□□□ -0.23
SSR4-204ENST00000370087 AGAP6Q5VW22 663 aa13.6□□□□□ -0.23
SSR4-204ENST00000370087 FAM71E1Q6IPT2 247 aa13.6□□□□□ -0.23
SSR4-204ENST00000370087 GALNT18Q6P9A2 607 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms