RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 RAB3AP20336 220 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 SF3A2Q15428 464 aaKnown RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 ATPAF1Q5TC12 328 aaPredicted RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 OR52E8Q6IFG1 317 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 IL22RA1Q8N6P7 574 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 FNDC9Q8TBE3 224 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 C7orf43Q8WVR3 580 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 TAAR8Q969N4 342 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 MRI1Q9BV20 369 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 RBM24Q9BX46 236 aaKnown RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 MTHFD2LQ9H903 347 aaPredicted RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 TPRP12270 2363 aaKnown RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 ECM29Q5VYK3 1845 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 KIAA0355O15063 1070 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 GSRP00390 522 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 FAM163BP0C2L3 166 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 SPOCK1Q08629 439 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 EXOSC6Q5RKV6 272 aaKnown RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 ZNF461Q8TAF7 563 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 TSACCQ96A04 125 aaPredicted RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 BMFQ96LC9 184 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 RANBP9Q96S59 729 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 OR51J1Q9H342 316 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 SCN3AQ9NY46 2000 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 NEURL4Q96JN8 1562 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 EFCAB7A8K855 629 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 FAM171A2A8MVW0 826 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 F5H5K5 113 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 LCMT2O60294 686 aaKnown RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 SERPINE2P07093 398 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 PROS1P07225 676 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 RAB7AP51149 207 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 MPPED2Q15777 294 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 UPP1Q16831 310 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 NDUFAF5Q5TEU4 345 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 NETO1Q8TDF5 533 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 DIO2Q92813 273 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 PRAMEF2O60811 474 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 SEC14L2O76054 403 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 TM4SF1P30408 202 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 ACY1Q03154 408 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 GALNT1Q10472 559 aaPredicted RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 ETFRF1Q6IPR1 90 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 CTU1Q7Z7A3 348 aaKnown RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 CHTF18Q8WVB6 975 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 TXNDC15Q96J42 360 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 P2RX1P51575 399 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 MZT1Q08AG7 82 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 NLGN4YQ8NFZ3 816 aaPredicted RBP11.78□□□□□ -0.52
HCFC1-202ENST00000369984 OR51L1Q8NGJ5 315 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 NPRL2Q8WTW4 380 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 DCDC2BA2VCK2 349 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 DVL2O14641 736 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 CBR1P16152 277 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 IL32P24001 234 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 LMAN2Q12907 356 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 CDK5R2Q13319 367 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 TMEM19Q96HH6 336 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 OR5B2Q96R09 309 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 RDH14Q9HBH5 336 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 ZNF160Q9HCG1 818 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 TMEM181Q9P2C4 612 aa11.78□□□□□ -0.52
HCFC1-202ENST00000369984 HAPLN1P10915 354 aaPredicted RBP11.77□□□□□ -0.52
HCFC1-202ENST00000369984 APLNRP35414 380 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 SH3BP2P78314 561 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 ZXDBP98169 803 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 DOC2AQ14183 400 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 CLECL1Q8IZS7 167 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 IL17RDQ8NFM7 739 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 OR5D14Q8NGL3 314 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 OR1J4Q8NGS1 313 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 MRPL38Q96DV4 380 aaKnown RBP11.77□□□□□ -0.52
HCFC1-202ENST00000369984 UHRF1Q96T88 793 aaPredicted RBP11.77□□□□□ -0.52
HCFC1-202ENST00000369984 PRRT1Q99946 306 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 TRAPPC13A5PLN9 417 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 KLF8O95600 359 aaPredicted RBP11.77□□□□□ -0.52
HCFC1-202ENST00000369984 NPBWR1P48145 328 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 DAP3P51398 398 aaKnown RBP11.77□□□□□ -0.52
HCFC1-202ENST00000369984 ZNF169Q14929 603 aaPredicted RBP11.77□□□□□ -0.52
HCFC1-202ENST00000369984 OR4N5Q8IXE1 308 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 ZNF610Q8N9Z0 462 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 SLC2A11Q9BYW1 496 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 GJD2Q9UKL4 321 aa11.77□□□□□ -0.52
HCFC1-202ENST00000369984 KDM4FA0A1W2PPD8 638 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 KRBA1A5PL33 1030 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 EIF4EP06730 217 aaKnown RBP11.77□□□□□ -0.53
HCFC1-202ENST00000369984 OR9K2Q8NGE7 335 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 SLC7A13Q8TCU3 470 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 SCAMP4Q969E2 229 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 SENP5Q96HI0 755 aaPredicted RBP11.77□□□□□ -0.53
HCFC1-202ENST00000369984 CAPNS2Q96L46 248 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 DPH1Q9BZG8 443 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 HOXD1Q9GZZ0 328 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 PRRC2BQ5JSZ5 2229 aaKnown RBP11.77□□□□□ -0.53
HCFC1-202ENST00000369984 NAP1L6A6NFF2 107 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 CD79AP11912 226 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 SULF2Q8IWU5 870 aa11.77□□□□□ -0.53
HCFC1-202ENST00000369984 MTMR14Q8NCE2 650 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms