RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 TRDV1A0A1B0GX56 115 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 H0YGG7 62 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 POLR1CO15160 346 aaPredicted RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 IFI30P13284 250 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 FGF9P31371 208 aaPredicted RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 FXYD6P3P58550 94 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 ARF3P61204 181 aaPredicted RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 DUSP8Q13202 625 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 KIR2DS3Q14952 304 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 FCRLBQ6BAA4 426 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 CD200R1LQ6Q8B3 271 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 FAM3CQ92520 227 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 FAM131CQ96AQ9 280 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF486Q96H40 463 aaPredicted RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 DDX28Q9NUL7 540 aaKnown RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 GABRPO00591 440 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 AGR2O95994 175 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 LSSP48449 732 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 OR1Q1Q15612 314 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 KLHL12Q53G59 568 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF628Q5EBL2 1059 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 DCST2Q5T1A1 773 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 ATAD3CQ5T2N8 411 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 TRIM48Q8IWZ4 208 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 RIPOR3Q96MK2 946 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 TP63Q9H3D4 680 aaPredicted RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 PIGUQ9H490 435 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 SIDT1Q9NXL6 827 aaKnown RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF221Q9UK13 617 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 MEIOCA2RUB1 952 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 AKAP8O43823 692 aaKnown RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 SLC16A1P53985 500 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 RANBP3LQ86VV4 465 aaPredicted RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF761Q86XN6 746 aaPredicted RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 ARIH2OSQ8N7S6 290 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 COX18Q8N8Q8 333 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 AP3S1Q92572 193 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 NDRG2Q9UN36 371 aaKnown RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 C19orf53Q9UNZ5 99 aaPredicted RBP16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 N6AMT1Q9Y5N5 214 aa16.82■□□□□ 0.28
UBQLN4-201ENST00000368309 PRUNE2Q8WUY3 3088 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 UNC119BA6NIH7 251 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 HMGN1P05114 100 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 SHC2P98077 582 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 IFITM2Q01629 132 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 FZD5Q13467 585 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 P2RY14Q15391 338 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 SHHQ15465 462 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF542PQ5EBM4 170 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 FAM181AQ8N9Y4 354 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 SMAP2Q8WU79 429 aaPredicted RBP16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 SLC35B4Q969S0 331 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 PTGFRNQ9P2B2 879 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 NCKAP1Q9Y2A7 1128 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 EXOGQ9Y2C4 368 aaKnown RBP16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 TRAPPC13A5PLN9 417 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 C12orf71A8MTZ7 269 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 STX11O75558 287 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 REM1O75628 298 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 KIAA1024LP59773 190 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 VASNQ6EMK4 673 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 CNIH2Q6PI25 160 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF322Q6U7Q0 402 aaPredicted RBP16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 SAMD14Q8IZD0 417 aaPredicted RBP16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF614Q8N883 585 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF350Q9GZX5 532 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 EVA1BQ9NVM1 165 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 HRO43593 1189 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 HLA-DPB1P04440 258 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 CSTF1Q05048 431 aaKnown RBP16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 GDPD1Q8N9F7 314 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 CAMKVQ8NCB2 501 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 FANK1Q8TC84 345 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 TMEM239Q8WW34 195 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 MRGPRX1Q96LB2 322 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 CD180Q99467 661 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 SLC22A4Q9H015 551 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 PILRAQ9UKJ1 303 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 GRIP1Q9Y3R0 1128 aa16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 SIRT4Q9Y6E7 314 aaPredicted RBP16.81■□□□□ 0.28
UBQLN4-201ENST00000368309 GXYLT2A0PJZ3 443 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 URADA6NGE7 173 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 PLA2G10O15496 165 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 HYAL3O43820 417 aaPredicted RBP16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 CT62P0C5K7 136 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 PAICSP22234 425 aaKnown RBP16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 GABRA3P34903 492 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 THSD4Q6ZMP0 1018 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 ABHD13Q7L211 337 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 ZAR1Q86SH2 424 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 ZNF619Q8N2I2 560 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 CHAC2Q8WUX2 184 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 RERGQ96A58 199 aaPredicted RBP16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 ZFYVE21Q9BQ24 234 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 MED17Q9NVC6 651 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 IGHA1P01876 353 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 SRP54P61011 504 aaKnown RBP16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 ALG11Q2TAA5 492 aa16.8■□□□□ 0.28
UBQLN4-201ENST00000368309 TMEM99Q8N816 258 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms