RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PPP2R2BQ00005 443 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 KRR1Q13601 381 aaKnown RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 DAG1Q14118 895 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 LARS2Q15031 903 aaKnown RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 OXA1LQ15070 435 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 CYP27C1Q4G0S4 372 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 CT45A2Q5DJT8 189 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 NHSL2Q5HYW2 709 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 OTUD3Q5T2D3 398 aaPredicted RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 C6orf183Q5T699 404 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 TBPL2Q6SJ96 375 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 TMEM179BQ7Z7N9 219 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 CARM1Q86X55 608 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 PRSS58Q8IYP2 241 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 MORN4Q8NDC4 146 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 OR52P1PQ8NH57 321 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 WDR36Q8NI36 951 aaKnown RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 ZNF721Q8TF20 911 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 CHAC2Q8WUX2 184 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 ZG16BQ96DA0 208 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 NXPE2Q96DL1 559 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 SPSB2Q99619 263 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 PIP5K1AQ99755 562 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 YTHDF1Q9BYJ9 559 aaKnown RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 OR2B2Q9GZK3 357 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 QRSL1Q9H0R6 528 aaKnown RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 VNN3Q9NY84 501 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 KCND3Q9UK17 655 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 DTX4Q9Y2E6 619 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 GPR55Q9Y2T6 319 aaPredicted RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 LYVE1Q9Y5Y7 322 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 U3KQV3 271 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 URB1O60287 2271 aaKnown RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 NBEAQ8NFP9 2946 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 DLGAP1O14490 977 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 EPPINO95925 133 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 DBIP07108 87 aaKnown RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 INHBBP09529 407 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 PRKACBP22694 351 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 PIGAP37287 484 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 HMGA2P52926 109 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 EIF3IQ13347 325 aaKnown RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 RTP5Q14D33 572 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 DCAF12Q5T6F0 453 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 NPSR1Q6W5P4 371 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 MAGEE2Q8TD90 523 aaPredicted RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 RMND5BQ96G75 393 aaPredicted RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 G6PC3Q9BUM1 346 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 ULBP3Q9BZM4 244 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 OR8D2Q9GZM6 311 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 HMG20AQ9NP66 347 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 SMPD3Q9NY59 655 aaPredicted RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 STMN3Q9NZ72 180 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 COPS7AQ9UBW8 275 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 ACAD8Q9UKU7 415 aa11.16□□□□□ -0.62
USF1-203ENST00000368021 MAGED1Q9Y5V3 778 aaPredicted RBP11.16□□□□□ -0.62
USF1-203ENST00000368021 LOC105371267A0A1B0GV96 52 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 GXYLT2A0PJZ3 443 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 OR6C76A6NM76 312 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 H3BSA7 217 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 ALOX12BO75342 701 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 ALX3O95076 343 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 IL7RP16871 459 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 ZNF28P17035 718 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 IL32P24001 234 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 RBMS1P29558 406 aaKnown RBP11.15□□□□□ -0.62
USF1-203ENST00000368021 ETV5P41161 510 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 PPICP45877 212 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 DCAF7P61962 342 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 EPS8Q12929 822 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 EIPR1Q53HC9 387 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 TCTN3Q6NUS6 607 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 LANCL3Q6ZV70 420 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 COMTD1Q86VU5 262 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 CYP4Z1Q86W10 505 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 VRK2Q86Y07 508 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 OR1N1Q8NGS0 311 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 OIT3Q8WWZ8 545 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 METTL21AQ8WXB1 218 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 ZCCHC14Q8WYQ9 949 aaKnown RBP11.15□□□□□ -0.62
USF1-203ENST00000368021 TFAP2CQ92754 450 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 PMEPA1Q969W9 287 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 ARHGDIGQ99819 225 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 DDA1Q9BW61 102 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 ITPAQ9BY32 194 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 SOX17Q9H6I2 414 aaPredicted RBP11.15□□□□□ -0.62
USF1-203ENST00000368021 CPNE5Q9HCH3 593 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 KLHL28Q9NXS3 571 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 SLC13A4Q9UKG4 626 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 CBLCQ9ULV8 474 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 PPIEQ9UNP9 301 aaKnown RBP11.15□□□□□ -0.62
USF1-203ENST00000368021 ZNF443Q9Y2A4 671 aaPredicted RBP11.15□□□□□ -0.62
USF1-203ENST00000368021 CHST2Q9Y4C5 530 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 MGAQ8IWI9 3026 aa11.15□□□□□ -0.62
USF1-203ENST00000368021 AHCTF1Q8WYP5 2266 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 A8MUA0 341 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 TNFRSF11BO00300 401 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 SCO2O43819 266 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 NID1P14543 1247 aa11.14□□□□□ -0.63
USF1-203ENST00000368021 DCKP27707 260 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms