RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 ZNF18P17022 549 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NPY1RP25929 384 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NMT1P30419 496 aaKnown RBP0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 GDI1P31150 447 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 GNPDA1P46926 289 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 KCNJ1P48048 391 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NPY2RP49146 381 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NUMBP49757 651 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SGSHP51688 502 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NLRP11P59045 1033 aaKnown RBP0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 PRPS1P60891 318 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 HERVK_113P63132 956 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ERVK-8P63133 956 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 KRT83P78385 493 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 TSPY1Q01534 308 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 KARSQ15046 597 aaKnown RBP0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 FAM83EQ2M2I3 478 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 PARP6Q2NL67 630 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ANKRD20A8PQ5CZ79 823 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CCDC158Q5M9N0 1113 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SLX4IPQ5VYV7 408 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CAVIN1Q6NZI2 390 aaKnown RBP0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 COX15Q7KZN9 410 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 BPIFB2Q8N4F0 458 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CYB561D1Q8N8Q1 229 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 OR2T33Q8NG76 320 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 OR10G2Q8NGC3 310 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 OR52I1Q8NGK6 324 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SLC5A11Q8WWX8 675 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ERVK-6Q9BXR3 956 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ACPTQ9BZG2 426 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ULBP2Q9BZM5 246 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 MAGT1Q9H0U3 335 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 COG4Q9H9E3 785 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 AKIRIN1Q9H9L7 192 aaPredicted RBP0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 FAM114A2Q9NRY5 505 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 STARD5Q9NSY2 213 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 GDAP2Q9NXN4 497 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SEPT10Q9P0V9 454 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 MBD2Q9UBB5 411 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 MTRF1LQ9UGC7 380 aaKnown RBP0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 OR12D3Q9UGF7 316 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 OPN4Q9UHM6 478 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 UBQLN1Q9UMX0 589 aaKnown RBP0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 EIF3LQ9Y262 564 aaKnown RBP0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 MAB21L2Q9Y586 359 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 MROH7-TTC4A0A0A0MT08 1334 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 FCGBPQ9Y6R7 5405 aaPredicted RBP0.78□□□□□ -2.29
RNU6-1048P-201ENST00000364054 SAGE2PA6NJ88 616 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 GFYI3L273 518 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 SULT2B1O00204 365 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 TLR4O00206 839 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 SLC28A1O00337 649 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 TM9SF1O15321 606 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 PPIHO43447 177 aaKnown RBP0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 MUC1P15941 1255 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 IFNAR1P17181 557 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 MAGEA4P43358 317 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 MTTPP55157 894 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 CHRNB3Q05901 458 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 ZNF154Q13106 437 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 MADCAM1Q13477 382 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 CCDC57Q2TAC2 916 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 COX19Q49B96 90 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 ANKRD20A4Q4UJ75 823 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 LY6G6FQ5SQ64 297 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 ANKRD20A2Q5SQ80 823 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 DNLZQ5SXM8 178 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 ANKRD20A1Q5TYW2 823 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 ANKRD20A3Q5VUR7 823 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 OR8G2PQ6IF36 304 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 LEG1Q6P5S2 330 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 C6orf89Q6UWU4 347 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 CLEC4GQ6UXB4 293 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 UNQ9370/PRO34162Q6UXP9 181 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 UNC5DQ6UXZ4 953 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 B3GLCTQ6Y288 498 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 C19orf35Q6ZS72 473 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 FAM220AQ7Z4H9 259 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 P4HA3Q7Z4N8 544 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 NRMQ8IXM6 262 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 TRUB1Q8WWH5 349 aaKnown RBP0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 NPAS2Q99743 824 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 FAM213AQ9BRX8 229 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 NDFIP1Q9BT67 221 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 SRXN1Q9BYN0 137 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 NLNQ9BYT8 704 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 ZNF350Q9GZX5 532 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 NACA2Q9H009 215 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 MAF1Q9H063 256 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 CALHM2Q9HA72 323 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 IL1RAPL2Q9NP60 686 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 ZCCHC3Q9NUD5 404 aaKnown RBP0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 AIG1Q9NVV5 245 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 ZNF586Q9NXT0 402 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 MAD2L2Q9UI95 211 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 DUSP12Q9UNI6 340 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 TP53TG5Q9Y2B4 290 aa0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 YTHDF2Q9Y5A9 579 aaKnown RBP0.77□□□□□ -2.29
RNU6-1048P-201ENST00000364054 GMPPBQ9Y5P6 360 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms