RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 OR4N4Q8N0Y3 316 aa17.79■□□□□ 0.44
CMTM3-201ENST00000361909 WDR48Q8TAF3 677 aa17.79■□□□□ 0.44
CMTM3-201ENST00000361909 SPRYD4Q8WW59 207 aaPredicted RBP17.79■□□□□ 0.44
CMTM3-201ENST00000361909 YIPF5Q969M3 257 aa17.79■□□□□ 0.44
CMTM3-201ENST00000361909 NEIL2Q969S2 332 aa17.79■□□□□ 0.44
CMTM3-201ENST00000361909 LINC00052Q96N35 136 aa17.79■□□□□ 0.44
CMTM3-201ENST00000361909 CAMK1GQ96NX5 476 aa17.79■□□□□ 0.44
CMTM3-201ENST00000361909 PFDN2Q9UHV9 154 aa17.79■□□□□ 0.44
CMTM3-201ENST00000361909 C2orf92A0A1B0GVN3 265 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 OR6C65A6NJZ3 312 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 A8MXK9 166 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 TNRC18O15417 2968 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-201ENST00000361909 PEX14O75381 377 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 IL3P08700 152 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 GIFP27352 417 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 PPP2R1BP30154 601 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 CRYZQ08257 329 aaKnown RBP17.78■□□□□ 0.44
CMTM3-201ENST00000361909 SYTL3Q4VX76 610 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 LRRC73Q5JTD7 316 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 SFXN4Q6P4A7 337 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 LIPIQ6XZB0 460 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 CHMP1BQ7LBR1 199 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 TMPRSS13Q9BYE2 586 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 SPRTNQ9H040 489 aaPredicted RBP17.78■□□□□ 0.44
CMTM3-201ENST00000361909 ATPIF1Q9UII2 106 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 DYRK1BQ9Y463 629 aa17.78■□□□□ 0.44
CMTM3-201ENST00000361909 CTDSPLO15194 276 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 GSTZ1O43708 216 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-201ENST00000361909 KELP23276 732 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 B2MP61769 119 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 SLBPQ14493 270 aaKnown RBP eCLIP17.77■□□□□ 0.44
CMTM3-201ENST00000361909 FAM69AQ5T7M9 428 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 PM20D2Q8IYS1 436 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 NRSN1Q8IZ57 195 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 TMEM159Q96B96 161 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 ZNF764Q96H86 408 aaPredicted RBP17.77■□□□□ 0.44
CMTM3-201ENST00000361909 FOPNLQ96NB1 174 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 ABHD1Q96SE0 405 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 PLA2G12AQ9BZM1 189 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 IFT46Q9NQC8 304 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 PRSS16Q9NQE7 514 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 TMEM5Q9Y2B1 443 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 C5orf42Q9H799 3197 aa17.77■□□□□ 0.44
CMTM3-201ENST00000361909 LRRN3E7EW58 273 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 C1QTNF3-AMACRE9PGA6 284 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 G3V3Q6 166 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 HMGN4O00479 90 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 ZNF593O00488 134 aaPredicted RBP17.77■□□□□ 0.43
CMTM3-201ENST00000361909 B3GALNT1O75752 331 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 KLHL18O94889 574 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 SLC16A8O95907 504 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 RAB3AP20336 220 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 IGFBP4P22692 258 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 VSX2P58304 361 aaPredicted RBP17.77■□□□□ 0.43
CMTM3-201ENST00000361909 RGS7BPQ6MZT1 257 aaPredicted RBP17.77■□□□□ 0.43
CMTM3-201ENST00000361909 HSD11B1LQ7Z5J1 315 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 TECPR1Q7Z6L1 1165 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 LINC00518Q8N0U6 118 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 BBS10Q8TAM1 723 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 OSTF1Q92882 214 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 FBXW5Q969U6 566 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 FAIM2Q9BWQ8 316 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 LRRN3Q9H3W5 708 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 ANKRD19PQ9H560 264 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 ZNF175Q9Y473 711 aa17.77■□□□□ 0.43
CMTM3-201ENST00000361909 FZD7O75084 574 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 C1GALT1C1LP0DN25 315 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 CALCRP30988 508 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 CAPZA2P47755 286 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 TSPAN5P62079 268 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 B3GNTL1Q67FW5 361 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-201ENST00000361909 SHFQ7M4L6 423 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 NLRC3Q7RTR2 1065 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 NR2C2APQ86WQ0 139 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 SIAH3Q8IW03 269 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 TRAM1L1Q8N609 369 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 FAM71CQ8NEG0 241 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 TRMT10AQ8TBZ6 339 aaKnown RBP17.76■□□□□ 0.43
CMTM3-201ENST00000361909 ARRDC3Q96B67 414 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 TREX2Q9BQ50 279 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-201ENST00000361909 AHSPQ9NZD4 102 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 MBD1Q9UIS9 605 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-201ENST00000361909 ENTPD4Q9Y227 616 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 RASD1Q9Y272 281 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 NINQ8N4C6 2090 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 PLXNA2O75051 1894 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 SERPIND1P05546 499 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 ELFN1P0C7U0 828 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 BLVRAP53004 296 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 ZP1P60852 638 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 PRSS53Q2L4Q9 553 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 ZNF791Q3KP31 576 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-201ENST00000361909 HENMT1Q5T8I9 393 aaKnown RBP17.76■□□□□ 0.43
CMTM3-201ENST00000361909 METTL11BQ5VVY1 283 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 FAM46CQ5VWP2 391 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 SHEQ5VZ18 495 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 RFLNAQ6ZTI6 216 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 HSD17B13Q7Z5P4 300 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-201ENST00000361909 KLBQ86Z14 1044 aa17.76■□□□□ 0.43
CMTM3-201ENST00000361909 SPICQ8N5J4 248 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms