RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 MAN2A2P49641 1150 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 ARFIP1P53367 373 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 PTTG1IPP53801 180 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 COX10Q12887 443 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 CST6Q15828 149 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 TBR1Q16650 682 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 PLA1AQ53H76 456 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 MFSD4BQ5TF39 518 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 TANGO2Q6ICL3 276 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 PODNL1Q6PEZ8 512 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 VITQ6UXI7 678 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 MORN4Q8NDC4 146 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 OR8J1Q8NGP2 316 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 SUN3Q8TAQ9 357 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 XAGE5Q8WWM1 108 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 ZBTB8AQ96BR9 441 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 MS4A6EQ96DS6 147 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 TMEM80Q96HE8 168 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 C12orf66Q96MD2 445 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 RACGAP1Q9H0H5 632 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 C11orf54Q9H0W9 315 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-202ENST00000360642 IL21RQ9HBE5 538 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 INIPQ9NRY2 104 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 CLEC2DQ9UHP7 191 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 PEX16Q9Y5Y5 336 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 HEATR5BQ9P2D3 2071 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 TRPM6Q9BX84 2022 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 A0A0G2JN53 185 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 E9PLN8 166 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 AQP9O43315 295 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 CSO75390 466 aaKnown RBP6.81□□□□□ -1.32
CLCN3-202ENST00000360642 SNX4O95219 450 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 KAT7O95251 611 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 CHRM4P08173 479 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 ACP5P13686 325 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 SSR2P43308 183 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 NCBP2P52298 156 aaKnown RBP eCLIP6.81□□□□□ -1.32
CLCN3-202ENST00000360642 RUNX3Q13761 415 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 C1orf94Q6P1W5 598 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 ZER1Q7Z7L7 766 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 CCDC190Q86UF4 302 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 RAB42Q8N4Z0 105 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 NANOGP1Q8N7R0 232 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 VKORC1Q9BQB6 163 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 TIMM29Q9BSF4 260 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 XKR8Q9H6D3 395 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 ABCB10Q9NRK6 738 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 TMEM140Q9NV12 185 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 GDE1Q9NZC3 331 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 CES1P1Q9UKY3 287 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 CFL2Q9Y281 166 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 SLC17A4Q9Y2C5 497 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 RPL36Q9Y3U8 105 aaKnown RBP6.81□□□□□ -1.32
CLCN3-202ENST00000360642 STON1Q9Y6Q2 735 aa6.81□□□□□ -1.32
CLCN3-202ENST00000360642 A0A075B6Q4 140 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SCAMP1O15126 338 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PGRMC2O15173 223 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PRKRAO75569 313 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 UGT2B17O75795 530 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PAK4O96013 591 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 STATHP02808 62 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 NR2F1P10589 423 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 MMP11P24347 488 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 MST1P26927 711 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 S100A5P33763 92 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PTGER1P34995 402 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 CRYBB2P43320 205 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 DUSP2Q05923 314 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SLAMF1Q13291 335 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 CEBPEQ15744 281 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 CASP12Q6UXS9 341 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 KRT73Q86Y46 540 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 LINC00471Q8N535 108 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 FAM83FQ8NEG4 500 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 OR5M3Q8NGP4 307 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 BBS10Q8TAM1 723 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SFXN5Q8TD22 340 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 TMEM171Q8WVE6 324 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 CNRIP1Q96F85 164 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 GPA33Q99795 319 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 FAIM2Q9BWQ8 316 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 RAB11FIP5Q9BXF6 653 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 POLDIP3Q9BY77 421 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ZCCHC3Q9NUD5 404 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 DNAJC27Q9NZQ0 273 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ANKMY1Q9P2S6 941 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 TESQ9UGI8 421 aaKnown RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ATG4BQ9Y4P1 393 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 TMEM221A6NGB7 291 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 H3BN98 237 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HAT1O14929 419 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 LATO43561 262 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PRKYO43930 277 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 NME6O75414 186 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 DNTTP04053 509 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HBQ1P09105 142 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 HIST1H1TP22492 207 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-202ENST00000360642 ABCD3P28288 659 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 PPP2R1BP30154 601 aa6.8□□□□□ -1.32
CLCN3-202ENST00000360642 SOX6P35712 828 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms